Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02813 ATGGCGAAACCAGCAACCCCAACTTCTACAATTACCGAAAGGGTAAGCTCCAAAACGGTGGAGCAAGCCGTGAATTCCCTCCTAAAATGGAGGACTTCCAAGTCCCAAAAGGAAAAACCGAAGCTTTTTGAGCAAGACGACGAATTCTTTTACCTGATTCTCACCCTCAAGAAAATTCCTCAAGAGGGTCGTGTTAATCCTCACAAAATTGAACTCCCACATTCTCTCCTCTCTGAATTCTCAGAGCTATGTTTGATCATCGACGACAGACCCAAGTCGAATCTAACCAAAGACGATGCtcagaagaagataaaatcgGAGAATATTCCGGTTTCCAAGGTTTTGAAGCTCTCGAAGCTCAGGTCTGATTATCGTCCATTCGAGGCAAAGCGAAAACTTTGTGATTCTTACAATATGTTTTTGGCAGATAAGAGGGTGGTGCCGCTGTTGCCGGGGGTGTTggggaattatttttttaagaagaggAAGATTCCGGTGCCGTTGGATTTGAAGCATAAAAATTGGAAGGAGCAGATTGAGAGGACATGTTCGTCTGCATTGTTGTACCTGAGGACGGGTGCTTGTTGTGTAGTGAAAGTTGCGAAAGTTGGAATGGAAAAGAATCAGATTATTGAGAATGTGATTGCTGCGATTAATGGGACTGCGGATGTGGTGCCCAAAAAGTGGAGGAATGTGCGGTCTTTTCATTTGAAGCTGTTGGAGTCACTGGCTTTGCCAATTTATCAGGCAGTCCCGGACGCGAAGTTGAAGATTGATGGAATTAAGGACGAGGAGGGTGAGGCGAAGGTGGAAGAGGGTGGTAAGAAAGGGGATAAGAAAGTGGGCAAGAAGGGGAGGATTCACGAGGTTAGATACATGGATGATGTAGGTGAGGAAGTATATAGTGAAGATGATGGGAATATTgtggaagaagatgatgacaGTGAGAATGAAGAAATGGGCAGTGGAGGATTGttggagaagaagagaaagaaaggaagtaCGATAGAGGAAGGGGCTCTTACTGAGTTAAAACGATTGAAAAAGTCAGCTAAGGACAAGAAAATACAAAGTACCAAAGAGCAGCAAGATGGGTTGTTTTCCAAAttgatgaaggaaaatgagatgaagcaaaagaaaaaggaattagCTGTTGAAGATGGAGAGTCTGGcaagaagaaaagtaagagGATTGCTTA 1199 0.3912 MAKPATPTSTITERVSSKTVEQAVNSLLKWRTSKSQKEKPKLFEQDDEFFYLILTLKKIPQEGRVNPHKIELPHSLLSEFSELCLIIDDRPKSNLTKDDAQKKIKSENIPVSKVLKLSKLRSDYRPFEAKRKLCDSYNMFLADKRVVPLLPGVLGNYFFKKRKIPVPLDLKHKNWKEQIERTCSSALLYLRTGACCVVKVAKVGMEKNQIIENVIAAINGTADVVPKKWRNVRSFHLKLLESLALPIYQAVPDAKLKIDGIKDEEGEAKVEEGGKKGDKKVGKKGRIHEVRYMDDVGEEVYSEDDGNIVEEDDDSENEEMGSGGLLEKKRKKGSTIEEGALTELKRLKKSAKDKKIQSTKEQQDGLFSKLMKENEMKQKKKELAVEDGESGKKKSKRIA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02813 399 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 11 306 - -
Bva12g02813 399 Gene3D - 93 185 IPR016095 -
Bva12g02813 399 Coils Coil 341 361 - -
Bva12g02813 399 MobiDBLite consensus disorder prediction 302 320 - -
Bva12g02813 399 SUPERFAMILY Ribosomal protein L1 14 248 IPR023674 -
Bva12g02813 399 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 11 306 - -
Bva12g02813 399 CDD Ribosomal_L1 20 247 IPR028364 -
Bva12g02813 399 MobiDBLite consensus disorder prediction 302 399 - -
Bva12g02813 399 MobiDBLite consensus disorder prediction 321 399 - -
Bva12g02813 399 Pfam Ribosomal protein L1p/L10e family 36 242 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02813 Bva-Chr12 20326861 20328445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02813 136 238 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 2.63e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02813 K14775 - zju:107427461 456.447