Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02806 ATGTggatgtttgaaaattttcagGGTCTATTTTCTGTCCATAAATATCTGTCTGCTATTGGCCAACCCACTTCcatatttgcaaaattttcacCTGAGTTTCTGAGTAATACCAAGGAGCTAGCTAGAACTAGCTCAAAGGTTCTAGGCCCATATGGAGCTTCCAACCGTGGACGCTTATATGAGTATGCTAACAACAGTGTTAGAACAACTATTGAAAGGTACAAGAAAGCATGCGCTGCTTCCTCAAACACAGAATCTGTTGCTGAAGCCAATACACagTTTTACCAGCAAGAAGCATCCAAATTAAGAAGACAGATCAAAGAGATTCAGAATCTAAACAGGCACATACTAGGTGAAGCTCTTAGCACTTTGAGTCTTAAAGAACTAAAGAACCTCGAGGGAAGATTGGAGAAGGGTTTAAGCAGAGTTAGATCCAGAAagCATGAAACACTGTTTGCTGAGGTCGAGTTCATGCAAAAGCGGGAAATGGAGCTGCAAAACCATAACAATTATCTGCGAGCAAAGATAGCTGAACATGAGAGGGCAAGAGAACAGCAACCAAATTTGATGCCCGCAACTGTGTGTAATTCCATACCATCACAGCAATCATATGACAGAAATTTCTTCCCCGTAAATCTCTTAGATTCCAATCATCAATATTCTCGTTCGGACCAGACAGCTCTCCAGCTTGTTTG 698 0.3926 MWMFENFQGLFSVHKYLSAIGQPTSIFAKFSPEFLSNTKELARTSSKVLGPYGASNRGRLYEYANNSVRTTIERYKKACAASSNTESVAEANTQFYQQEASKLRRQIKEIQNLNRHILGEALSTLSLKELKNLEGRLEKGLSRVRSRKHETLFAEVEFMQKREMELQNHNNYLRAKIAEHERAREQQPNLMPATVCNSIPSQQSYDRNFFPVNLLDSNHQYSRSDQTALQLV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02806 232 Coils Coil 93 116 - -
Bva12g02806 232 ProSiteProfiles K-box domain profile. 93 183 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva12g02806 232 Pfam K-box region 91 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva12g02806 232 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 55 224 - -
Bva12g02806 232 PANTHER SERUM RESPONSE FACTOR HOMOLOG 55 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02806 Bva-Chr12 20288867 20295012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02806 55 232 MADS-box Gene Family AT3G58780 63.784 3.13e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02806 K09264 - gmx:100792224 293.893