Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02803 ATGGCTGCAAGCTTGGCTTCCAAATTTTCTCGTGGCTGGTCCCTGTTCGGTGGGTTGGGCAGCAGTTTGTCTGGCATGCTCACCACAGCAAATGAGATGACATGCAGCAATTTGTTATCTCAGCAGCAAAGAACATTCATACAAATGAGGACTGTTCTCAAGGTCGTCGATAATTCTGGGGCTAAAAAGGTGATGTGCATACAAGCTTTGAAAGGGAAGAAAGGAGCAAGGTTAGGTGACACAATCGTAGCATCAGTAAAAGAAGCTCATCCTAACggaaaagtgaagaaaggaaaggtTGTATACGGCGTGGTTGTGCGTGCAGCTATGCAACGAGGTCGATGTGATGGTAGCGAGGTCAAGTTTGATGATAATGCCGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGAACAAGAGTCTTTGGACCAGTTCCGCATGAGCTGAGGCAGAAGAAGCATGTTAAGATTCTTACTTTGGCTGGCCATATTgcgta 497 0.4427 MAASLASKFSRGWSLFGGLGSSLSGMLTTANEMTCSNLLSQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02803 164 Hamap 50S ribosomal protein L14 [rplN]. 45 164 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva12g02803 164 Pfam Ribosomal protein L14p/L23e 46 163 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva12g02803 164 TIGRFAM rplN_bact: ribosomal protein uL14 46 163 IPR005745 GO:0003735|GO:0006412|GO:0015934
Bva12g02803 164 ProSitePatterns Ribosomal protein L14 signature. 102 128 IPR019972 -
Bva12g02803 164 SUPERFAMILY Ribosomal protein L14 46 163 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bva12g02803 164 Gene3D Ribosomal protein L14 45 164 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bva12g02803 164 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 21 164 - -
Bva12g02803 164 SMART Ribosomal_L14_2 45 164 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva12g02803 164 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 21 164 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02803 Bva-Chr12 20273343 20275601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02803 56 147 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 4.16e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02803 K02874 - gmx:100818301 244.202