Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02801 ATGGACAACAAGGCTCAAGCTCGGTTTACGCCGGGAAGGCAATCTTCCCTTGCGCCGGAGAGGGAGGATTATGGTCTTGACGCCGGTGGGGCGTTGGACCCTAGTGTGCGGTTAATGTACTTGGCGAATGAAGGGGACTTGGATGGAATTAACGAGCTTTTGGACTCTGGGAGTGATGTTAATTTCAGGGACATTGACGGCCGTACAGCTTTGCATATTGCTGCGTGCCAGGGACTCACTGATGTTGTCGAATTGTTGCTCCAAAAGGGTGCCGAGGTCGACCCACTGGACCGCTGGGGCAGCTCGCCTCTAGCAGATGCAATGTACTATAAAAATCATGAAGTTGTCAAACTTTTGGAGAAACATGGTGCAAAACCTCCGATGGCTCCCATGCATGTGGAAAATGCTCGTGAAGTCCCAGAATATGAGATTAATCCTTCTGAACTAGATTTCACTAACAGTGTTCGCATAACAAAGGGAACTTTTCGAATTGCATCATGGCGTGGAATTCAAGTTGCTGTTAAAACACTTGGGGAGGAAGTATTCGCTGATGATGATAAAGTAAAGGCATTTCATGATGAGCTAGCATTGCTTCAGAAAATACGTCATCCAAATGTAGTGCAATTTTTAGGTGCTGTAACACAAAGCACCCCAATGATGATTGTCACAGAATATCTGCCCCAGGGAGATCTTTATGCCTACTTGAAGCGGAAAGGTGCATTAAAACCAATTACAGCTGTGAAGTTTGCACTTGACATAGCTAGcaGGGGAATGAATTATTTGCATGAACATAGGCCAGAAGCCATCATACACCGAGATCTTGAACCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTCAGCAAGTTGCTCAAAGTTACAAAAACAGTCAAAGAAGACAGACCTGTGACTTGCCAGGATACTTCATGGCGTTATGTGGCTCCAGAGGTCTATAGAAATGAGGAATATGATACCAAAGTGGATGTGTTTTCATTTGCTTTAATATTACAGGAGATGATTGAAGGCCGTCCACCATTTTCAACAAAGCCAGAAAATGAAGTTCCTAAGGCATATGCTGTAAATGAGCGTCCACCATTTAAAGCTTCACCAAAGAATTATGCTTATGGCTTAAGAGAGTTGATCCAGAACTGTTGGGATGAAGAACCATACAAGAAACCAACTTTTAGGCAAATAATTGAAAGATTAGAATGTATCTGTCACCACCTTGCTCAAAAGAGACGCTGGAAGGTTAATTTCAGATGCCTTCAGAATCTGGAGTTCCTGTTTAAGGGGAATCCGACGAATCCGAGCAGTCGATCATCTCGCTATGATACAATCAGATG 1364 0.4391 MDNKAQARFTPGRQSSLAPEREDYGLDAGGALDPSVRLMYLANEGDLDGINELLDSGSDVNFRDIDGRTALHIAACQGLTDVVELLLQKGAEVDPLDRWGSSPLADAMYYKNHEVVKLLEKHGAKPPMAPMHVENAREVPEYEINPSELDFTNSVRITKGTFRIASWRGIQVAVKTLGEEVFADDDKVKAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLYAYLKRKGALKPITAVKFALDIASRGMNYLHEHRPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVTKTVKEDRPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGRPPFSTKPENEVPKAYAVNERPPFKASPKNYAYGLRELIQNCWDEEPYKKPTFRQIIERLECICHHLAQKRRWKVNFRCLQNLEFLFKGNPTNPSSRSSRYDTIR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02801 454 Pfam Protein tyrosine and serine/threonine kinase 157 409 IPR001245 GO:0004672|GO:0006468
Bva12g02801 454 Gene3D - 31 138 IPR036770 -
Bva12g02801 454 PIRSF ILK 1 430 - -
Bva12g02801 454 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 432 - -
Bva12g02801 454 Gene3D Transferase(Phosphotransferase) domain 1 143 418 - -
Bva12g02801 454 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Bva12g02801 454 SUPERFAMILY Protein kinase-like (PK-like) 157 411 IPR011009 -
Bva12g02801 454 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 432 - -
Bva12g02801 454 SMART ANK_2a 66 95 IPR002110 GO:0005515
Bva12g02801 454 SMART ANK_2a 99 128 IPR002110 GO:0005515
Bva12g02801 454 SMART ANK_2a 33 62 IPR002110 GO:0005515
Bva12g02801 454 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Bva12g02801 454 MobiDBLite consensus disorder prediction 1 26 - -
Bva12g02801 454 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Bva12g02801 454 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Bva12g02801 454 CDD STKc_MAP3K-like 165 409 - -
Bva12g02801 454 ProSiteProfiles Protein kinase domain profile. 93 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02801 Bva-Chr12 20264522 20271034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02801 6 426 MAP Kinase Kinase Kinase AT4G18950 68.998 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bva12g02801 PK_Tyr_Ser-Thr 6.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02801 - - gmx:100795964 748.043