Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02783 ATGGACGGTGAAGGAGGAAGAGGAGGCTCGCGCGAGAGAGAAATTTCCACTAGGAAGAGAGGAGTGGAAGGTGAGAGAAGGTTCAAGGGGATTAGGATGAGAAAGTGGGGTAAGTGGGTTGCTGAGATCAGGGAGCCCAATAAGCGCTCTAGGATTTGGCTAGGTTCCTATTCCACGGCGGTAGCGGCGGCGAGGGCGTACGACACGGCCGTGTTTTATCTCAGGGGACCATCCGCGAGGCTTAATTTCCCGGAGCTTCTGGTTGGAGAAGGGGGCGGTGGTGGCGGTGCTGACATGTCGGCTGCTTCGATAAGGAAGAAAGCTACAGAAGTTGGTGCTAGGGTGGATGCACTTCAAGCGGCTCTCCACCACAATCATCACCATGCTTCGGCGGCGCCGGAGCTCATGGAACGAAGTGTTTCCGCCGAAGAGTTTTTGGAACGGGTCGATCTTAATAAGATTCCCGAACCCGAGAATTCGGACTGTGACTGGGATAGGAGTTA 503 0.5487 MDGEGGRGGSREREISTRKRGVEGERRFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGPSARLNFPELLVGEGGGGGGADMSAASIRKKATEVGARVDALQAALHHNHHHASAAPELMERSVSAEEFLERVDLNKIPEPENSDCDWDRS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02783 167 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Bva12g02783 167 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Bva12g02783 167 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Bva12g02783 167 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Bva12g02783 167 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Bva12g02783 167 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Bva12g02783 167 MobiDBLite consensus disorder prediction 1 21 - -
Bva12g02783 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 12 161 - -
Bva12g02783 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 161 - -
Bva12g02783 167 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Bva12g02783 167 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02783 Bva-Chr12 20166280 20167212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02783 15 165 AP2-EREBP Transcription Factor Family AT2G23340 64.744 1.38e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva12g02783 AP2 5.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02783 K09286 - rcu:8262023 191.045