Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02779 ATGATTTGTTCAGTAAAGAAACCTGGGATAGCGATAAGTGGTTCTGATGTTGTTTTTCGGAAAAAATGTGGAAACCCAGTTCAGCAATGGTCTCCTTTACCTTCTCTTTCAAGGGGACAAACCCAGAGATCTCTTGTTTCTGTGCAAAACGTTTCAGTTCAAAGACCTTTGCACCTGTCTTCTGCATCTGTTGGGAATTTTATTTCAGCAAAACGTGAAAGGAATTTGATCGCTTGTGAAGCTTACGAGGCAGACCGATCAGAGCCCATTGAATCACAGGCGCCACCAGAGGCAGCTAAGAAGCTGAAAATTGGAATTTACTTTGCGACCTGGTGGGCTCTGAACGTCGTGttcaatatttataacaagaaGGTTCTGAATGCGTATCCCTACCCATGGCTTACTTCAACTCTGTCACTTGCATGTGGGTCTCTCATGATGTTGATCTCCTGGGCCACGCGGATAGCTGAGACTCCAAAGactgattttgaattttggaagTCTTTGTTCCCGGTTGCTGTTGCACATACAATTGGACATGTAGCTGCAACGGTTAGCATGTCGAAAGTTGCAGTTTCATTCACCCATATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTGCTGGTTTCAAGATTTCTTTTGGGTGAGACATTCCCAGTGCCAGTTTATTTGTCCCTACTTCCAATTATCGGTGGCTGCGCTCTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATTTCTAATTTGGCATTTGTATTTCGTAACATTTTCTCGAAAAAGGGGATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTATGCTTGTTTGTCTATGTTGTCTCTCGTCATCCTCACACCATTCGCGATTGCTGTGGAGGGACCTCAGATGTGGGCAGCTGGATGGAAAACAGCCCTCTCTCAAATTGGACCGCAATTCATATGGTGGGTGGCTGCACAGAGTGTGTTCTATCATCTGTATAACCAGGTGTCATACATGTCTCTGGACGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCGGTCATAGTCTCGTCAATCATCATCTTCCACACACCAGTTCAGCCCATCAATGCTCTAGGAGCTGCTATTGCAATCCTCGGAACCTTCTTGTATTCACAGgCTAAGCAGTA 1187 0.4356 MICSVKKPGIAISGSDVVFRKKCGNPVQQWSPLPSLSRGQTQRSLVSVQNVSVQRPLHLSSASVGNFISAKRERNLIACEAYEADRSEPIESQAPPEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAETPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWKTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02779 395 Pfam Triose-phosphate Transporter family 102 391 IPR004853 -
Bva12g02779 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Bva12g02779 395 PANTHER SOLUTE CARRIER FAMILY 35 46 394 - -
Bva12g02779 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 392 - -
Bva12g02779 395 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 46 394 - -
Bva12g02779 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02779 Bva-Chr12 20148469 20152152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02779 29 395 Antiporters AT1G61800 80.811 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02779 K15283 - gmx:100801832 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00994 12 10334681 10338728 Bva12g02779 12 20148469 20152152 BWGD
Bva12g02779 12 20148469 20152152 Bva12g02779 12 20148469 20152152 ECH