Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02766 ATGTCATCACTCTTCTATCACTACTCCTCACTGATGATTCCTGGAActgattttctctttcaaccCATTTTCACACGTGGTCTATCAGGTTCACTACACCTCGTTTTGTTACTTGTTTTGCTTATCTCATGTATATGTGAGAAGAAAATGCAGGTGGCACCAAGagaaaatgcaagaaaagTGTTCCAGCATACTGGGTTTTTGTACTACAAGCAGACTCTACTCTGTTGCATAGCTGTTTGTATATTTGATCTTGTTTTGTCGTTATTGTACTACtttttttggtatgaaaatttttggcCCCAAGGGCTTGTGACAATTTCGGACTTGGCACTTAGAACAGTTGCTTGGGGTGCTGTTTGTGTTTACTTGCATTCTCGGTTCTCTAATTCTGATGAAAGGAATTTTCCCCTTCACTTGAGAATTTGGTGGGTTGTTTACTCTTCTGTTTCTTCTTGTTGCCTTGTAATAGATTTTGTAGCCTATGAAAAGAAAGCTATCTTCCCGATCATATATCTCCTTTCTGATATCTGTTCCTCTCTTATGGGTTTGTTTCTCTGTTATGTGTGGTTTTCTGTAACCAAAAATGCCAAACTTGAAGAAACCCTTTTGAATAGTAACTCCAGTGTAAGCAACAGTTATGATTCAAACAAGGCTAAAGGGGTTGAAAATCTAACCGCTTATGCAAATGCTGGATTATTCAGTGTTCTTACTTTCTCATGGTTGAGTCCTATTATTGCTCTTGGCAATAAGAAGATTCTGAACCTTGAGGACCTCCCTCAGCTTTCTAGTTATGACAGTGTCTATGGGGCCTTTCCAAATTTTAGAGAGAAGATTGAGTCCAAGGGTGGTGTAAATAGCAGAGTGACCACTCTTCATTTAGCAAAGGCATTAATCTTCTCAACATGGAAAGGGTTTCTTTTGTCAGGCTTTTTTGCATTCATGTGCACATGTGCTTCTTATGCTGGCCCCTATCTGATTGACACCTTTGTGCAATACCTCAATGGACAACGCGATTTTGAACACGAGGGCTATATTTTGGCATTGGTTTTTTTGGCTGCAAAACTTGTGGAGGGCTTGGCACAGAGGCATTGGACGTTTAGGTTCCAACAGGTTGGGGTAAGGGTACAAGCAATGTTGGTAGCTATGATCTATGCTAAAGGCTTGAATCTTTCGAGTCAGGCGAAAGAAGGTCGCACCAGTGGGGAAATTATCAACTTGATGACTGTTGATGCAGCAAGAGTAGGTGAATTTTGTTGGTACATGCATGATCCATGGATAACTGTTCTGCAAATTGCCTTGGCATTGTTGATTTTGTACAAAAGTGTTGGACTTGCTTCAATTGCTGCTTTTGTTGCCGCTGTTATTCTGATGCTGGCAAACTGGCCCTTGGCGTCATTGCAAGAGAAATTTCAAGGCAAGTTAATGGAGACAAAAGATAGAAGAATGAAGGTGACGTCTGAGATTTTAAAGAACATGAGGATACTAAAACTACAAGCATGGGAGATGAAGTTCTTGTCAAAGATCATTGAGATTAGGAACCTTGAGACAATTTGGCTAAAGAAATATCTAATAGGGAATGGAATGACCagatttctcttctcttctgccCCAACTTTTGTTGCTGTTGTTACCTTTGGTGCTTGTATTCTCATGGGGATCCCACTCGAATTAGGGAAGATCTTATCTACACTTGCAACTATCCAAATTCTTCAGCAGCCAATCTATGCTTTCCCTGATACAATTGCAGTGATGGCACAAACTAAGGTTTCCCTTGATAGGATTGCATCATTCCTTTGTCTCGACGATTTGCGGCCTGACATTATAGAGAAGCTTCCGAGGGGTACTTCCGATGCAGCAATTGAAATAGTTTATGGAAATTTCTCTTGGGATTTATCCTCAACCACTCCTACAttgcaaaatataaatgtCAAAGTTGGCCACAGCATGAGGGTTGCAGTTTGTGGCACTGTTGGTTCTGGAAAATCAAGTCTTCTTTCTTGCATCCTAGGAGAGGTTCCAAAGCTATCCGGAACCGTAAAGCTCTGTGGAACAAAGGCATATGTTGCTCAATCCCCATGGATACAAAGTGGCAAGATAGAAGAGAGCATATTATTTGGTGACCAGACCATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAGGCAAAGAGTACAAATAGCTCGTGCACTTTACCAAGATGCtgatatatatctatttgATGATCCTTTCAGTGCTGTGGATGCTCATACTGGTTCCCACCTCTTTAAgGAGTGTTTGCTAGGCCTCTTGAATTCAAAAACAGTGATATATGTGACTCATCAAGTAGAGTTCTTACCTGCCGCTGATCTAATATTGGTCATGAAAGATGGAAAGATCACTCAATCAGGGAAGTACAATGATATCCTCAACTCTGGCACAGATTTTATAGAACTTGTAGGTGCACATAGGGAAGCTTTGTCTGCACTTAAGTCCTTAGAGAGAAGGCCCACTTCTAAAAATTTGAGAGTCACGGTGGAAGACACTGATTTGTTAAGAGAATTTGGACTAGAgcaaaaagaggaaaacaaaGATGTTCAGAATGGTAAAGCAGATGATACAAATGAGCCAAAAGGTCAGCTTGttcaagaggaagaaagagaacaagGTAAAGTTGGCTTTGGAGTCTATTGGAAATACATCAGAACTGCATATGGAGGAGCTTTTGTACCCTTCATATTGGTTGCCCAAGTTCTTAATCAGGCTCTTCAAATTGGGAGCAATTATTGGATAGCATGGGCAACTCCAGTTTCAGCAAATACGGAATCTACTGTTGGAAGCTTCACACTTGTCGGTGTCTATGTCGCTTTGTCCATAGGATGTTCTTTCTTTATCCTTGCTAGAGTCATGCTTATTCTTATAGCTGGATACAAGACAGCCACCATACTCTTCAATACAATGCATTTGTGTTTCTTCCGAGCCCCCATGTCATTCTTTGACAGTACTCCAAGTGGGCGAATCCTTAATAGAGCCTCCACTGACCAAAGTGCTTTAGATATGGCAATACCAAATCTAATTGGTGCATTTTCCTTATATGTGATAGCGCTCTTGGGAAATATTGCTGTGATGTCTCAAGTAGCATGGCAGGTTTTCATAGTATTTATTCCTGTGATTGCAGCTTGCCTATGGTGCCAGCAATACTACTCACCAGCCGCACGAGAATTGGCCCGATTGGTTGGCACATGTGAAGCTCCAGTTATACAACATTTTGCTGAAAGCATTTCAGGATTGATGACCATCAGAAGTTTTGACCAAGAATCAAGATTTCACGACacaaatatgaaattgataGACAGATATTCCCAACCAAAACTATACGCTGCTACTGCAATAGAATGGCTGTGCTTGAGATTGGACTTGTTATCCTCTATCACATTTGCCTTCTGTTTGGTTTTCTTGGTATCTTTTCCTAATGCGATCACTGCTCCTGGCATTGCTGGTTTGGCTGTGACATATGGACTGAGCATAAACGGATTGCAATTTAGGATAATTTGGTTTCTTTGTAACATGGAGAACAAAATTATATCAGTAGAAAGGATACTTCAGTACACCAGTATTCCAAGTGAGCCTCCTTTAGTAATAGAAGAAAAGCATCCCCATTGTTCTTGGCCATCCTTTGGGGAGATCCATGTCCAGGATTTACAGGTTCGGTATGCGCCTCACTTGCCTCTTGTTTTGCGTGGTCTTACGTGCACTTTCAATGCTGGAGCAAAAACTGGTATTGTGGGGAGAACTGGCAGTGGAAAATCAACACTGGTGCAAACACTTTTCCGAATGGTTGAACCTGTGTCTGGTCAAATAATGATAGATGACATCAACATCTCTCTGATTGGATTACATCATTTGCGGTCGAGACTAAGTATTATTCCTCAGGATCCAACTATGTTTGAAGGGACTATAAGAAGTAATCTGGACCCATTGGAAGAATACACAGATGAACAAATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGACAGAAAGAAGGGAAGCTAGACTCCATAGTTACTGAGAGTGGAGAAAATTGGAGCATGGGACAGAGGCAACTGGTCTGCCTCGGCCGCGTTCTGcttaagaaaagtaaaatcttGGTGCTTGATGAAGCAACTGCCTCGGTTGATACAGCAACagataatattattcagaAAACTATCAAGCAACATTTTTCAGAATGCACAGTCATTACAATTGCACATAGAATAACTTCTATCCTTGATAGTGACATGGTTTTGTTTCTACGTCAAGGGCTTATTGAGGAGTATGATTCACCGAAGACATTGCTTAAGAAAAAATCTTCGTCTCTTGCTCAACTAGTTGCTGAATACACACAGAGAGATCAAACTCAGGATTTGAAATCTTGTTG 4418 0.3945 MSSLFYHYSSLMIPGTDFLFQPIFTRGLSGSLHLVLLLVLLISCICEKKMQVAPRENARKVFQHTGFLYYKQTLLCCIAVCIFDLVLSLLYYFFWYENFWPQGLVTISDLALRTVAWGAVCVYLHSRFSNSDERNFPLHLRIWWVVYSSVSSCCLVIDFVAYEKKAIFPIIYLLSDICSSLMGLFLCYVWFSVTKNAKLEETLLNSNSSVSNSYDSNKAKGVENLTAYANAGLFSVLTFSWLSPIIALGNKKILNLEDLPQLSSYDSVYGAFPNFREKIESKGGVNSRVTTLHLAKALIFSTWKGFLLSGFFAFMCTCASYAGPYLIDTFVQYLNGQRDFEHEGYILALVFLAAKLVEGLAQRHWTFRFQQVGVRVQAMLVAMIYAKGLNLSSQAKEGRTSGEIINLMTVDAARVGEFCWYMHDPWITVLQIALALLILYKSVGLASIAAFVAAVILMLANWPLASLQEKFQGKLMETKDRRMKVTSEILKNMRILKLQAWEMKFLSKIIEIRNLETIWLKKYLIGNGMTRFLFSSAPTFVAVVTFGACILMGIPLELGKILSTLATIQILQQPIYAFPDTIAVMAQTKVSLDRIASFLCLDDLRPDIIEKLPRGTSDAAIEIVYGNFSWDLSSTTPTLQNINVKVGHSMRVAVCGTVGSGKSSLLSCILGEVPKLSGTVKLCGTKAYVAQSPWIQSGKIEESILFGDQTIIGERGINLSGGQRQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLNSKTVIYVTHQVEFLPAADLILVMKDGKITQSGKYNDILNSGTDFIELVGAHREALSALKSLERRPTSKNLRVTVEDTDLLREFGLEQKEENKDVQNGKADDTNEPKGQLVQEEEREQGKVGFGVYWKYIRTAYGGAFVPFILVAQVLNQALQIGSNYWIAWATPVSANTESTVGSFTLVGVYVALSIGCSFFILARVMLILIAGYKTATILFNTMHLCFFRAPMSFFDSTPSGRILNRASTDQSALDMAIPNLIGAFSLYVIALLGNIAVMSQVAWQVFIVFIPVIAACLWCQQYYSPAARELARLVGTCEAPVIQHFAESISGLMTIRSFDQESRFHDTNMKLIDRYSQPKLYAATAIEWLCLRLDLLSSITFAFCLVFLVSFPNAITAPGIAGLAVTYGLSINGLQFRIIWFLCNMENKIISVERILQYTSIPSEPPLVIEEKHPHCSWPSFGEIHVQDLQVRYAPHLPLVLRGLTCTFNAGAKTGIVGRTGSGKSTLVQTLFRMVEPVSGQIMIDDINISLIGLHHLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDEQIWEALDMCQLGDEVRQKEGKLDSIVTESGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQKTIKQHFSECTVITIAHRITSILDSDMVLFLRQGLIEEYDSPKTLLKKKSSSLAQLVAEYTQRDQTQDLKSC 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02766 1472 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02766 1472 Gene3D - 1207 1460 IPR027417 -
Bva12g02766 1472 CDD ABC_6TM_ABCC_D2 905 1199 IPR044726 GO:0140359
Bva12g02766 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 816 IPR027417 -
Bva12g02766 1472 SUPERFAMILY ABC transporter transmembrane region 299 606 IPR036640 GO:0005524|GO:0016021
Bva12g02766 1472 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 197 707 - -
Bva12g02766 1472 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 706 1466 - -
Bva12g02766 1472 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Bva12g02766 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1224 1458 IPR003439 GO:0005524
Bva12g02766 1472 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1187 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02766 1472 Pfam ABC transporter transmembrane region 907 1149 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02766 1472 Pfam ABC transporter transmembrane region 307 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02766 1472 Pfam ABC transporter 1241 1389 IPR003439 GO:0005524
Bva12g02766 1472 ProSitePatterns ABC transporters family signature. 719 733 IPR017871 GO:0005524
Bva12g02766 1472 Pfam ABC transporter 639 687 IPR003439 GO:0005524
Bva12g02766 1472 SUPERFAMILY ABC transporter transmembrane region 905 1205 IPR036640 GO:0005524|GO:0016021
Bva12g02766 1472 CDD ABCC_MRP_domain2 1222 1442 - -
Bva12g02766 1472 Pfam ABC transporter 708 746 IPR003439 GO:0005524
Bva12g02766 1472 Gene3D ABC transporter type 1, transmembrane domain 867 1205 IPR036640 GO:0005524|GO:0016021
Bva12g02766 1472 Gene3D ABC transporter type 1, transmembrane domain 276 603 IPR036640 GO:0005524|GO:0016021
Bva12g02766 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1214 1450 IPR027417 -
Bva12g02766 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 817 IPR003439 GO:0005524
Bva12g02766 1472 SMART AAA_5 648 794 IPR003593 -
Bva12g02766 1472 SMART AAA_5 1250 1435 IPR003593 -
Bva12g02766 1472 Gene3D - 609 706 IPR027417 -
Bva12g02766 1472 Gene3D - 707 838 IPR027417 -
Bva12g02766 1472 CDD ABCC_MRP_domain1 621 794 - -
Bva12g02766 1472 MobiDBLite consensus disorder prediction 856 881 - -
Bva12g02766 1472 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 197 707 - -
Bva12g02766 1472 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 706 1466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02766 Bva-Chr12 20079717 20085969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02766 621 840 Calmodulin-binding Proteins AT2G36910 27.341 2.72e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02766 - K05666 gmx:106794105 2024.98