Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02749 aTGATTGTCCAAATTGCAGAGAAAAAGCCAACAGATCATTCTCCGGTAGTCGTGAAGATGGTGAAGCAAGATGACACCAGAGGGAAGATCATCACTTGCAAAGCTGCGGTGGCGTACGGTCCCGGCGAGCCGTTCGTGGTGGAGCAAGTTCAAGTTCATCCTCCTCAGAAAATGGAGGTCAGAATCAAGATCCTCTTCACCTCAATCTGTCACACTGATCTCAGCGCTTGGCAGGGGGAGAACGAGGCTCAGTGTGCTTATCCTAGAATTTTCGGCCACGAAGCTTCTGGAATCGTTGAGAGCGCGGGAGAGGGCGTGGAGGATCTGAAGGAAGGGGACAACGTGGTGGCCATATTCAACGGAGAGTGCGGCGAATGCGGGTACTGCAAGCGTGAGGAAACAAACAAGTGCGAGAGGTTCGGGGTGAATCCGATGAAGAAGGTGATGGTTAGCGACGGAAAGAGCCGGTTCGCCACCGTGGACGGCCGACCCATATACCATTTCCTGAATACCTCGACTTTCAGCGAGTACACAGTTTTGGACTCGGCCTGCGTCGTCAAGCTCCCCTCTGCCACCGAGGTTGACCTCAAGAAGCTGACCTTGCTTAGTTGCGGAGTTTCTACCGGCGTTGGAGCTGCATGGAATACAGCCAATGTGAGTTCTGGTTCGACCGTAGCTGTCTTTGGTTTGGGCGCCGTGGGGCTTGCGGTTGCAGAGGGAGCACGAGCCAGAGGTGCATCCAAAATAATAGGTGTCGATATCAATCCtgataaatttatcaaagggCAAGCAATGGGAATCACAGACTTCATTAATCCAAGAGATGAGAAGAAAGCCGTATACGAGAGAATAAGAGAAATGACGGGTGGAGGCGTAGACTATAGCTTTGAATGTGCAGGAATTGTAGACGTCCTACGCGATGCCTTCTTGTCTGCACATCAGGGTTGGGGATTAACGGTTGTATTGGGGATTCATCCATCACCGAGAATGCTTCCCATCCATCCAATGGAGCTGTTTGATGGCCGTCAAATTGTAGCATCGGTGTTTGGAGGCTTCAAAGGGAAAACCCAATTGCCTCACTTTGCCAAACAATGCATGCATGGAgTTGTGAAGCTGGACGAGTTCATCACTCACGAGCTTCCCTTCGAGCAGATAAACAAAGCCTTTGAGCTTCTGGTATCTGGAAAGTCACTCAGATGTGTGCTGCACCTCTA 1214 0.5033 MIVQIAEKKPTDHSPVVVKMVKQDDTRGKIITCKAAVAYGPGEPFVVEQVQVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQCAYPRIFGHEASGIVESAGEGVEDLKEGDNVVAIFNGECGECGYCKREETNKCERFGVNPMKKVMVSDGKSRFATVDGRPIYHFLNTSTFSEYTVLDSACVVKLPSATEVDLKKLTLLSCGVSTGVGAAWNTANVSSGSTVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKGQAMGITDFINPRDEKKAVYERIREMTGGGVDYSFECAGIVDVLRDAFLSAHQGWGLTVVLGIHPSPRMLPIHPMELFDGRQIVASVFGGFKGKTQLPHFAKQCMHGVVKLDEFITHELPFEQINKAFELLVSGKSLRCVLHL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02749 404 Pfam Zinc-binding dehydrogenase 232 351 IPR013149 -
Bva12g02749 404 Pfam Alcohol dehydrogenase GroES-like domain 59 187 IPR013154 -
Bva12g02749 404 PANTHER ALCOHOL DEHYDROGENASE 26 403 - -
Bva12g02749 404 Gene3D - 36 399 - -
Bva12g02749 404 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 368 IPR036291 -
Bva12g02749 404 SUPERFAMILY GroES-like 26 228 IPR011032 -
Bva12g02749 404 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 92 106 IPR002328 GO:0008270|GO:0016491
Bva12g02749 404 Gene3D - 209 347 - -
Bva12g02749 404 SMART PKS_ER_names_mod 40 402 IPR020843 GO:0016491
Bva12g02749 404 SUPERFAMILY GroES-like 354 403 IPR011032 -
Bva12g02749 404 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 26 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02749 Bva-Chr12 20009416 20013112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02749 59 393 Monolignol Biosynthesis Gene Families AT2G21890 27.003 1.29e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02749 K00001 - gmx:100787307 622.854