Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02746 ATGGAAGGTATCATTGTAAGAAGAGTCATTCCCTCAGATAACAGTTGTCTATTTAATGCAGTCGGgTACGTTATGGAccatgacaaaaataaagctCCTGAGTTGAGACAGGTTATAGCTGCGACAGTAGCAAGTGAACAAGAGAAATACTCTGAAGCATTTCTTGGAAAGCCAAATGCAGAGTATTGTTCCTGGATACTTGACTCCGAGAAGTGGGGAGGTGCAATTGAGCTTTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCTTATGATATACAGACAACTCGATGTGATTTGTATGGCCAGGAAAGCAAGTATTCTGAAAGGGTTATGCTGATTTATGACGGTCTCCATTACGATGCATTAGCTATGTCTCCCTTTGAGGGGGCTCCCGAGGAGTTTGATCAGACCATATTTGCTGTACAGACAAACAGTAGCATTGGACCTGTTGAGGGGCACGCCATCAACTTTGTCAAGGAGCAACAAAGGAAACGTAGCTACACCGACACCTCCAACTTCACTCTGCGCTGTGGTGTGTGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCAGTGGAGCATGCGCAGGCAACTGGCCATGtcaattttcaagaatatAGATG 626 0.4265 MEGIIVRRVIPSDNSCLFNAVGYVMDHDKNKAPELRQVIAATVASEQEKYSEAFLGKPNAEYCSWILDSEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQESKYSERVMLIYDGLHYDALAMSPFEGAPEEFDQTIFAVQTNSSIGPVEGHAINFVKEQQRKRSYTDTSNFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02746 208 Pfam OTU-like cysteine protease 12 105 IPR003323 -
Bva12g02746 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Bva12g02746 208 Gene3D - 1 173 - -
Bva12g02746 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Bva12g02746 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Bva12g02746 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02746 Bva-Chr12 19997128 20000495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02746 1 208 C2H2 Transcription Factor Family AT1G50670 82.692 5.21e-133 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02746 K13719 - gmx:100793701 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02746 12 19997128 20000495 Bva12g02746 12 19997128 20000495 ECH