Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02744 ATGCCTATTTTCAACGCTTGTCAAACTATGATGAAGTGGTTTTCTGCAATGATAGAAGCAGCACTGATGCCTCAGGAGATTGTTTCTTGCTGGGTTTCTGCTGGCATTCACAATGCTCTTGTTGGTGTGATCATGAAATCTGTGGATAGAATTCTTTTTGCTGCATTTGCTTGCTTTTTGGCACTAGGAGGGTTTGTGATGGGAACAATTATAGGAGGCATTAAAGGGCAGACTTCAGAAGCTGGTTTTCTTGATGGGGCTGGAAAAGGAGCTGTCACAGGAGCCATTGCAGCTCTTGAATTGCTTGATTTTGAGGATGGTAGTGAGCCATTGTCTAAGGTTGCCCTATTGGGCAGTTTACTGAATGGGAAAGTACTTATGCAATGGGTGTGTCCAGCAGTTGCCCATACCTATCAGTGGCATATCGGTACACCAGAAACAATTTATAGAGAAGTATCAGATATATACGATATCAGCGGGGTTCCAGGCTTGTCCCAGAACATTATACAAACACTTGGCGTTCATCACTTCGATTCCAGCCAAATGTTCAAATTGTACAATGACTCATGCTGCCCAATTTGCTTCCAGGATTTTGAGGATGGAGAAATGCTGAGGACACTTCCCAAATGTGGCCACTTTTTTCACTTAGGCTGCATAGATAAATGGCTAATCCAACAGGGATCTTGCCCTATGTGTAGAACTTGTGTTCATGATCACATTCATGATTGCTGTTG 734 0.4305 MPIFNACQTMMKWFSAMIEAALMPQEIVSCWVSAGIHNALVGVIMKSVDRILFAAFACFLALGGFVMGTIIGGIKGQTSEAGFLDGAGKGAVTGAIAALELLDFEDGSEPLSKVALLGSLLNGKVLMQWVCPAVAHTYQWHIGTPETIYREVSDIYDISGVPGLSQNIIQTLGVHHFDSSQMFKLYNDSCCPICFQDFEDGEMLRTLPKCGHFFHLGCIDKWLIQQGSCPMCRTCVHDHIHDCC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02744 244 SMART ring_2 191 232 IPR001841 -
Bva12g02744 244 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 14 236 IPR044523 -
Bva12g02744 244 CDD RING-H2_PA-TM-RING 190 233 - -
Bva12g02744 244 ProSiteProfiles Zinc finger RING-type profile. 191 233 IPR001841 -
Bva12g02744 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 238 IPR013083 -
Bva12g02744 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 236 - -
Bva12g02744 244 Pfam Ring finger domain 191 233 IPR001841 -
Bva12g02744 244 SUPERFAMILY RING/U-box 183 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02744 Bva-Chr12 19992084 19993685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02744 52 233 C3H Transcription Factor Family AT5G66070 34.715 6.13e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02744 - K19041 gmx:100305612 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02744 12 19992084 19993685 Bva12g02744 12 19992084 19993685 ECH