Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02743 ATGGGTGGCTGTTTAACTAAAGACAGAGATTCAGATCATGAAGACAATGGCTACAGATCAGCTGGGACTACTACGGGGTACCACCCGAAGACCCACGAGCCATATATTAATCAGTCAAAACCACCAGCTTCACATGCTGCGCCTCCGCCGCCGTGGAAGCCATCAGTTCCTGGCCCTAGCCCAAAACATGTTCATAAATCAGATACTATATTGGGGAAAGCATTTGAAGATGTTAAACAGCAGTACACCATTGGGAAAGAATTGGGTAGAGGTCAATTTGGGGTAACTTATCTATGCACTGAAAATTCAACTGGGAGACGATATGCTTGCAAATCTATTTCAAAGAGAAAACTTAGTAGCAGAGCTGATAGAGAGGATGTAAAGAGGGAAATTCAGATTATGCAGCATTTGAGTGGACAACCCAACATTGTTGAGTTCAAAGGTGCTTATGAAGATAAGCAATCAGTTCATCTTGTGATGGAGCTATGTGCAGGTGGAGAGCTCTTTGATCGGATTATTGCTAAGGGGCATTACAGTGAAAGAGCTGCAGCTTCAATATGTAGACAAATTGTTAATGTTGTTCATATCTGCCACTTTATGGGTGTGATGCATAGGGATCTGAAGCCTGAGAATTTCCTCTTGTCCAGTAAAGATGAAAATGCACTTCTGAAAGCTACAGATTTTGGTTTGTCGGTTTTCATCGAAGAAGGAAAGGTGTATAGGGATATAGTTGGAAGTGCTTATTACGTTGCCCCAGAAGTTCTGCGTCGCAGATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATTTTGTATATCTTACTCAGTGGTGTACCTCCATTTTGGGCTGATACAGAAAGGGGAATCTTTGATGCCATATTGAAAGGGCATATCGACTTTGACAGTTCACCATGGCCAACCATATCAAGCAGTGCCAAGGACCTTGTTCGTAAGATGCTGACACAGGACCCAAAGAAACGCATTACATCTGCTCAGGTTTTAGATCACCCGTGGATTAGAGAAGATGGAAATGCCTCTGACAAGCCAATAGACAGTGCAGTCCTTTCTAGAATGAAGCAATTCAGAGCTATGAATAAACTAAAGAAGCTTGCCTTGAAGGTCATTGCCGAAAATCTTTCTGAGGAAGAGATCCAAGGGCTGAAGCAAATGTTTACAAATATGGACACTGACAAGAGTGGTACAATCACCTATGAGGAACTAAGGGCAGGATTGCAAAGACTTGGCTCAAAGCTCACCGAGGCTGAAGTACAGCAACTTATGGAAGCTGCTGATGTAGATGGGAACGGCACCATTGACTACATAGAATTTATAACTGCTACAATGCATAGACATAGGCTAGAAAGAGATGAGCATCTTTACAAGGCCTTCCAACATTTTGATAAAGATAACAGTGGGTTTATTACTAGAGATGAACTGGAAACAGCCATGAAAGAATATGGAATGGGCGATGAAGCAACGATCCGGGAAATTATATCAGAAGTTGATAGAGATAATGATGGTAGAATCAACTATGAAGAATTCTGTACAATGATGAGGAGTGGAATGCAACAAGGCAAGCTATTCTA 1589 0.4191 MGGCLTKDRDSDHEDNGYRSAGTTTGYHPKTHEPYINQSKPPASHAAPPPPWKPSVPGPSPKHVHKSDTILGKAFEDVKQQYTIGKELGRGQFGVTYLCTENSTGRRYACKSISKRKLSSRADREDVKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWADTERGIFDAILKGHIDFDSSPWPTISSSAKDLVRKMLTQDPKKRITSAQVLDHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKQMFTNMDTDKSGTITYEELRAGLQRLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQHFDKDNSGFITRDELETAMKEYGMGDEATIREIISEVDRDNDGRINYEEFCTMMRSGMQQGKLF 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02743 529 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Bva12g02743 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 524 - -
Bva12g02743 529 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Bva12g02743 529 MobiDBLite consensus disorder prediction 1 17 - -
Bva12g02743 529 Pfam EF-hand domain pair 388 448 IPR002048 GO:0005509
Bva12g02743 529 Pfam EF-hand domain pair 458 520 IPR002048 GO:0005509
Bva12g02743 529 SMART serkin_6 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02743 529 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 44 524 - -
Bva12g02743 529 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Bva12g02743 529 Gene3D - 349 523 - -
Bva12g02743 529 SUPERFAMILY Protein kinase-like (PK-like) 80 347 IPR011009 -
Bva12g02743 529 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Bva12g02743 529 ProSiteProfiles Protein kinase domain profile. 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02743 529 Gene3D Transferase(Phosphotransferase) domain 1 168 348 - -
Bva12g02743 529 Pfam Protein kinase domain 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02743 529 SMART efh_1 494 522 IPR002048 GO:0005509
Bva12g02743 529 SMART efh_1 387 415 IPR002048 GO:0005509
Bva12g02743 529 SMART efh_1 423 451 IPR002048 GO:0005509
Bva12g02743 529 SMART efh_1 459 487 IPR002048 GO:0005509
Bva12g02743 529 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Bva12g02743 529 CDD STKc_CAMK 81 339 - -
Bva12g02743 529 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Bva12g02743 529 MobiDBLite consensus disorder prediction 18 32 - -
Bva12g02743 529 MobiDBLite consensus disorder prediction 1 66 - -
Bva12g02743 529 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Bva12g02743 529 ProSiteProfiles EF-hand calcium-binding domain profile. 491 525 IPR002048 GO:0005509
Bva12g02743 529 CDD EFh 462 520 IPR002048 GO:0005509
Bva12g02743 529 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Bva12g02743 529 Coils Coil 405 425 - -
Bva12g02743 529 Gene3D Phosphorylase Kinase; domain 1 83 167 - -
Bva12g02743 529 SUPERFAMILY EF-hand 379 519 IPR011992 -
Bva12g02743 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Bva12g02743 529 MobiDBLite consensus disorder prediction 43 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02743 Bva-Chr12 19982785 19986616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02743 1 529 EF-hand Containing Proteins AT3G20410 73.588 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva12g02743 Pkinase 7.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02743 K13412 - qsu:111998297 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02743 12 19982785 19986616 Bva12g02743 12 19982785 19986616 ECH