Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02740 ATGGAGGAGACGGCGACTCTGAAGAAGGGCCCATGGACGGCAGTGGAGGACACGATTCTTGTTGAATATGTGAGAATGACCGGTGAAGGGAACTGGAATGCGGTGCAGAAGAACACAGGATTGGCTCGTTGTGGCAAGAGCTGTAGGCTGAGATGGGCTAACCATTTGCGACCCAATTTGAAGAAAGGTGCATTCTCTCCAGAAGAAGAGAAGCTCATTATTGAGCTTCATGCCCAGTTAGGCAACAAATGGGCCAAAATGGCTACTCTGATACCTGGGAGAACTGACAACGAAATCAAGAACTATTGGAACACGAGGATAAAGCGCCGCCGACGGCAGGGCCTGCCTCTTTACTCCGACGAGTTTGAGTCGGCGCACCCTTCAACGCCAGCCACACCGGCAACCCGTTCCACTCCGACCATCCCAACCACGTCCACCGCCACAAAATTCGATTTTGTTAATCAGAACCACCACCGTCTGTCTCCAACTCCACCCCCTCATTCTCCCCTCTCTTCACCTCTTGAGCCTAAACCAACCTTCTCCCCTCTGTCTCCTTCCCCGCCGTCCTTCACCTTTCAACGGCCCACTCCAGTTCTCTCTAACCCACTTCGTTTCAAACGTTTCCGCACCCTTCCAGGGTGGAACCCCCTCCAGGTCTTTCCCACACCCTCAAGCTTAGATGCACTTGAACATCAAAGTTTCGACACCCAATTGGTTGATCTTGACGCATTCAAGTTCCCTCTTCAATTTGACTCCATTTCCTCTGAAGTTCTTCAATCCCCATTAGATTCTGACCAAAGGGTCGCGTATCCTTTAGTTTTCCCAACCAAATTAGAGCTCCCTTCAAACCAATTTTCCAAACCCCTAGAACCAGTAATTATGTCTGATATGCTAATGAACAACCCTGATTCCCACACCCCTAATGGCTTTCTCGGAGATATTCTGATGGAAGCTGAGGCATTGGCATCAGGGCACACTTCCAAGAAACGAAACTACCTGACTTTAGATGAAGAAAACTACCTGTTTGATTATTTGCCTCTTAGCTTCCCTTACTGGACTTGTACCACTTCAGAACTAAAACCAGAGGAAGAAACTCAGGACTTGAGCGAAGACTTGTCACTATTCGCTGCAATGCCTTCCACGTTGCAGATTCCAGGTGGGCAGTGGCACGATAAGAGCGCCGCCGCAGCAGGAGGAGGATTGTTCATTGAACAAACTTCTGATAGTTTCGTGGCAGATGATTATTTAGGACATGACGCGAATACCATAGCTTCACTGTTTCCTATCACCACCGCAAGCCATACTGAAAACACGGGCTACTACCCTTGGGACGATTTACCTGGAATCTGCTG 1352 0.4919 MEETATLKKGPWTAVEDTILVEYVRMTGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIELHAQLGNKWAKMATLIPGRTDNEIKNYWNTRIKRRRRQGLPLYSDEFESAHPSTPATPATRSTPTIPTTSTATKFDFVNQNHHRLSPTPPPHSPLSSPLEPKPTFSPLSPSPPSFTFQRPTPVLSNPLRFKRFRTLPGWNPLQVFPTPSSLDALEHQSFDTQLVDLDAFKFPLQFDSISSEVLQSPLDSDQRVAYPLVFPTKLELPSNQFSKPLEPVIMSDMLMNNPDSHTPNGFLGDILMEAEALASGHTSKKRNYLTLDEENYLFDYLPLSFPYWTCTTSELKPEEETQDLSEDLSLFAAMPSTLQIPGGQWHDKSAAAAGGGLFIEQTSDSFVADDYLGHDANTIASLFPITTASHTENTGYYPWDDLPGIC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02740 450 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Bva12g02740 450 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 221 - -
Bva12g02740 450 SMART sant 8 58 IPR001005 -
Bva12g02740 450 SMART sant 61 109 IPR001005 -
Bva12g02740 450 MobiDBLite consensus disorder prediction 125 161 - -
Bva12g02740 450 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Bva12g02740 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Bva12g02740 450 Gene3D - 64 110 - -
Bva12g02740 450 MobiDBLite consensus disorder prediction 162 192 - -
Bva12g02740 450 PANTHER TRANSCRIPTION FACTOR MYB28-LIKE 2 221 - -
Bva12g02740 450 MobiDBLite consensus disorder prediction 121 195 - -
Bva12g02740 450 CDD SANT 64 105 IPR001005 -
Bva12g02740 450 Gene3D - 6 62 - -
Bva12g02740 450 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Bva12g02740 450 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 254 450 - -
Bva12g02740 450 CDD SANT 11 56 IPR001005 -
Bva12g02740 450 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Bva12g02740 450 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Bva12g02740 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Bva12g02740 450 PANTHER TRANSCRIPTION FACTOR MYB28-LIKE 254 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02740 Bva-Chr12 19968223 19970989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02740 7 123 MYB Transcription Factor Family AT2G32460 78.632 3.13e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva12g02740 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02740 - K09422 gmx:102659401 401.749