Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02732 ATGTGTTTTGGGATATTCGGTTGGTGGGGTAGAACGTTTAGCTCCTTTCAACTCTCCTACTGTTCCGTGGCCCCAAGTTTTCATCAAACAAGGTACATGGTTGATTTGGAAGTTCAGATCCCCACTCCTTTTGATCCATTCGCTGAAGCTAAAGAATCTGATGCCCCCGGAGCCAAAGAGTATGTGCATATCCGCATCCAGCAGAGGAATGGAAAAAAGAGTTTGACTACTGTTCAAGGGCTGAAGAAAGATTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAAGAGTTCTGCTGCAACGGGAATGTTGTGCAGGATAAAGAGCTGGGAAAGATAATCCAACTCCAAGGTGATCAGCGCAAGAACGTGTCCCAGTTTCTGGTTCAAGCTGGCCTTGTGAGGAAGGACCAGATTAAGATTCATGGTTTTTA 434 0.4562 MCFGIFGWWGRTFSSFQLSYCSVAPSFHQTRYMVDLEVQIPTPFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKDFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02732 144 CDD eIF1_SUI1 60 143 IPR005874 GO:0003743
Bva12g02732 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 33 144 - -
Bva12g02732 144 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 33 144 - -
Bva12g02732 144 SUPERFAMILY eIF1-like 31 144 IPR036877 GO:0003743|GO:0006413
Bva12g02732 144 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 38 144 IPR005874 GO:0003743
Bva12g02732 144 Gene3D - 24 144 - -
Bva12g02732 144 Pfam Translation initiation factor SUI1 59 132 IPR001950 GO:0003743|GO:0006413
Bva12g02732 144 ProSiteProfiles Translation initiation factor SUI1 family profile. 62 132 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02732 Bva-Chr12 19928396 19928951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02732 33 144 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 8.73e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02732 K03113 - gmx:100787664 227.639