Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02720 ATGGCGAATTTGCCCCAATCACTCTCTATGAATGCACCTTTTGGAAATCCCAGTGCGTCTGGCCAGAACCCTGCCGCTACTCAGGCCAACAAGGATCGCAAGATGGCCTCTGCCGAGCACTTGGTGCTTGACCTAAGCAATCCTGATCTCCGAGAAAATGCTCTTCTCGAGCTTTCAAAGAAGAGAGAGTTATTTCAAGATTTGGCTCCACTACTGTGGAATTCTTTTGGTACTATTGCAGCTCTTCTGCAGgAAATAGTTTCAATTTATCCTGTTCTTTCACCACCAAATCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTGGCACTTCTCCAGTGTGTAGCATCTCACCCGGATACAAGGATGCTATTCCTGAATGCTCATATACCTCTATATCTTTATCCTTTCCTTAATACAACAAGCAAGTCAAGACCGTTTGAGTACCTGAGACTTACCAGTTTAGGTGTCATTGGTGCCCTGGTGAAGGTTGATGATACAGAAGTTATCAGCTTCCTTCTCTCAACAGAGATAATCCCTTTGTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTAGCTACATTTATAGTTCAGAAGATTTTGCTGGATGATGTGGGCTTGGATTATATTTGTACTACAGCAGAGCGATTTTTTGCGGTAGGTCGTGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAACCTTCATCTCGTCTCTTGAAACATATTATCCGATGTTATCTTCGTCTGTCAGATAATCCGAGGGCTTGTGATGCATTGAGAAGTTGCCTCCCTGACATGTTAAGAGATGCCACTTTCAGTAGTTGTCTTCGTGAAGACCCAACGACCAGGAGGTGGTTGCAGCAATTGCTTCACAATGTTGGAGTGGCCAGGGTTCCTGCACTACAAGCTGGAGGAGGCTTTGAGCATATGATGTG 953 0.4512 MANLPQSLSMNAPFGNPSASGQNPAATQANKDRKMASAEHLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVARVPALQAGGGFEHMM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02720 317 MobiDBLite consensus disorder prediction 1 30 - -
Bva12g02720 317 Pfam Cell differentiation family, Rcd1-like 41 299 - -
Bva12g02720 317 SUPERFAMILY ARM repeat 43 273 IPR016024 -
Bva12g02720 317 PANTHER UNCHARACTERIZED 1 317 - -
Bva12g02720 317 MobiDBLite consensus disorder prediction 1 33 - -
Bva12g02720 317 PANTHER BNAA05G20110D PROTEIN 1 317 - -
Bva12g02720 317 Gene3D - 29 300 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02720 Bva-Chr12 19860689 19866164 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Bva12g02720 Rcd1 2e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02720 K12606 - pop:7483613 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01052 12 10624322 10629255 Bva12g02720 12 19860689 19866164 BWGD
Bva12g02720 12 19860689 19866164 Bva12g02720 12 19860689 19866164 ECH