Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02704 ATGGAGGATATCCCTGTCTCCTTGGCATCTAAGATTGCAGGCCATTTTTTCAGCCGTGCTCGCTATTTGTTCCGTTTCAACAGAGTTGTGGAAAATCTTCAAactgaaaaagagaatttgaaGTTAACCAGAGACTGCCTCCAGCAACTTGCTAAAAATGCCAAAAGCAAAGCTAGAAAAGTTGAGCCAGCTGTTGAGAAATTGCTACAAGATGTGGAAATTACTCTACAACAGGTACACAAGCTTGAAGCAAAAATAGAATCACGTAATAGCTGTTTTGGTGGGTGTTGTCATTATTTTCTAGCAAAGGAAGTGGCGAAAAGGACTCAGAAAATGATTGAGCTCAATGAAAAAAGCCAATTCATTAAGCCATTTTCTCAGCCCATTGAACTTCCTGGTAAGAAGTACTTTTCTCCCAAaggttttgtttatttcaaaTCAACAGAATCTGCTTTCAATGAACTTTGGGAGGCACTGAAAGACAGCAACACTTGCATGATGGGCCTGCATGGCATGGGGGGCTCAGGAAAAACAAGTTTGGTGAAACAGATAGGTAAGATGGCTGagaattttcttctatttaacAACGTTGTTACAGCAGTTGTCTCTCAGAATCCAAATGTTAGAGACATCCAAGGTCAAATTGCTTATCAGCTGGGTTTGAAATTGGAGGAAGAATCAGAATTCGGTAGAGCTCAACGACTGTCCAAGAGACTAGAGAATGGGAAGATTCTTATAATCTTGGATGATGTGTGGGAGAAGCTAGATTTTGAAGCTATAGGAGTTCCTTCCAATGGAAAGAACAAAGGTTGCAGGGTCCTCATAACCACACGAATTCGAAGAGTGTGTGTTTCTATGGGCTGCACTAGAATAACAGAACTGTCTCTTTTAAATGAAGAGGAAGGttggattttatttaaactccATGCAGATATAGGTGATGACTGCCCAGATGACTTTAAGGGTGTGGCAAGGAAAGTATCTCTTGAATGTAAAGGTTTGCCTATTGCCATTGTGACTGTGGGAAGAACACTAAGGGGAAAGAGCTTTGAGAAGTCGGAGTTAGCATTGTCAAGGCTAAGGGAATCAAAACCAGTAGATATCGAAGTGGGTTTGAGAAGTACTTATGCATGTCTCAGATTAAGTTATGATAATTTGAGAAACCAAGCTGCCAAGTCTCTCTTCTTGTTGTGTTGTATGTTTCCTGAGGATTATAAGATCAATATGGAGGATTTGTTTCGCTATTGGAAGGAATTGCTGGTGTCGGGTGAGTCTCTTTGCGAAGCAAGGAGAGAAATGAATTTAGCTGTTAACATTCTCTTAGATTCTTATCTCTTAATGCCTGCTGAATACGAGCAATGTGTACAGATGCATGATTTGGTTCGGGATGTAGCATTGTGGATTGCTTTGGAAGAAGGTCAAGCAGTTATGGCAGCTACAGGTAAAGATGCTAGATTACTGGTAGAAGATGAAACTATAAGTCAGAAGGCCAAGATATCTTTGTGGGAGATGGTAAATGGTCAGCTGAGTGATCAGTTAAATTGCCCAAAACTTGATACCCTATTGCTTCATTCTAAAGATTTGGGATTTGAAGTAGCAAATGCAGATTTTGGAGGGATGAAAGCCCTCAAAGTCTTGGCTTTTACAAGATTTAGCTATTCTTGGCATGTATATCAGTGGGGGTTGACGTCAGTCTCCAGTTTGTCAATACCACAGTCAATCAAGTCATTGACAAGTCTTGGAGCTCTTTGCTTGAGAGGATACACATTAGGTGACATATCTATTTTGGGAACCCTTAAAGGTCTTGAGATTCTTGACTTGCGCGGttcttcttttgatgaatTGCCCGCTGGAATTGCAGAGTTGAAGAAACTGAAGCTTCTGGATTTGTTCAACTGTTCGATTGCGAAGAATAACCCTTATGAAGTTATCGAGAGAATTTCACAGCTTGAAGAGTTGTATATATGGACAACTAGACATCATTCTTTGGAAAACGTCTCATTCCCGACACTGCAAAGGTATGCTATAGGCTGCACCACAAGAGCAATCTACTCTTTTTCATCAAACCCTTATGAATTTCTAGAAAAGCATATGCCAGCAAGAGCTTTATGCttagaagattttgatgtCTCTTCTCCAAATCATTCATCATCATCCATCAAAGATCTCTTACCAAGAGCAGAAAGTCTCCATTTGCGGTACCTTAATGGAGgctacaaaaatataatcccAAGCGTGGATAAATCAGGTATGAATCACTTGGTTGGCTTAATACTTGAATCTTGTTCAGAGATAGAATGCCTTGTAGATAGTAATAGGAATACCAATCCACATATGAATCTGTTTCCAAAAGAAGCTGTATTCTCTGAGCTGGTTGCTATTAGACTACAACACATGAATCGACTCGAAGAAGTTTTCCGGGATCCATCTTCATTATGCTCTCTCAAAAATTTACAAGAGGTAATAGCCAATTACTGCCCAAGATTGTATAGCATATCTTttccaatgaattcaaatcTCAGTAGTCTTAAGATCTTGAGATTGGAAAGGTGTGAAATGCTAATGTCATCAATCTTCACACCATCTATTGCCCAAACTCTAGTGCTACTAGAGCACATCAACATATGCGAATGCAAGAGATTGAAGCATATAATCAGTGAagctgaggaagaagaaattgttgaTTATTCCTTGAAAATGTTCCCAAGTTTAAGGATTCTTAGTGTTGAGGGATGTGAGAGTTTGGAGTCAATATTTCCTATCTATTTTGCTAAAGGTTTAGAGAGATTGGAAGATGTAGTCATCAGCAGGAATCCTAAGCTGAAATATGTATTTGGCACACACAAGGAAGATCAGATTGTGATGGATATTGATTTACCTTCTTTAAGGAGAATCACACTAAATTCATTGACAAgcctaataaatatttacccaAAATATTGTCGTCCGAGGTCGCCAAATTTGAAGGTGTGCAGATATGAAAATTGTATGGAGTTGTCTACCAATGCCGTTCATAATATGGTGGTTCGTTCAGATATCCGACAAGATCATAAAGCTACCAAGGAGAGGGACATATTCTGGATGGCGGATGCACCATCTGTTCAATGGTGCAATCAAGACATTCCTCCAGCTTTGCGAGATTTGCTAAAGTTTCAAGTCAAAGAAGGGTCTGATAGTAACAGAGAAATAGAGCCATTAAACTCAAACTTAGAGAATCTGAATTTACAGGATTTATCAGAGTTACAGTTCATCTGGAATTGCCttccaaaatttcttatacttCAGAAACTTAGATTTGTAAATTTGCACACATGCCCAAAACTTAAAGACATCTTCTCTTTGACCATTGTTAAAAGCTTACCCAAGTTGGAGAGTTTGAAGATAAGCAACTGTGAGGAATTGGAGGAAATTGTTTCCTCAGATTCAGACAAGGCAGAAAACCATTTAAATCAGTCTGTTTGCTTCCCAGAACTGCGATATCTAGAAGTTCTAAAATGCAACAAGTTGAAGAGCCTTTTCAATGGTTTCATGGCTTCTCATTTCCCTAAATTAGCAACTCTGAAAATTGCGAGGTGCTCTCAACTAGACCATGCTTTTCGTTTGGAACCTAAAGCTAATCATGAAGGTAGGGGAAGTGGTCGAAAAGCTACAGATCCAAAGCAAGTGGTGTTTCCGAAGCTGGGAGAAATAGAACTCGTATGTTTGCTGAATTTCACCAAGATTTGCCAGGGGTTCAAGTTGCAGCAGCCTTTGAAATCTTACAAGGTGCAAGATTGCCCAAAATATACCTCTTCGACTTCCACTTACAAAGGGTA 3815 0.3777 MEDIPVSLASKIAGHFFSRARYLFRFNRVVENLQTEKENLKLTRDCLQQLAKNAKSKARKVEPAVEKLLQDVEITLQQVHKLEAKIESRNSCFGGCCHYFLAKEVAKRTQKMIELNEKSQFIKPFSQPIELPGKKYFSPKGFVYFKSTESAFNELWEALKDSNTCMMGLHGMGGSGKTSLVKQIGKMAENFLLFNNVVTAVVSQNPNVRDIQGQIAYQLGLKLEEESEFGRAQRLSKRLENGKILIILDDVWEKLDFEAIGVPSNGKNKGCRVLITTRIRRVCVSMGCTRITELSLLNEEEGWILFKLHADIGDDCPDDFKGVARKVSLECKGLPIAIVTVGRTLRGKSFEKSELALSRLRESKPVDIEVGLRSTYACLRLSYDNLRNQAAKSLFLLCCMFPEDYKINMEDLFRYWKELLVSGESLCEARREMNLAVNILLDSYLLMPAEYEQCVQMHDLVRDVALWIALEEGQAVMAATGKDARLLVEDETISQKAKISLWEMVNGQLSDQLNCPKLDTLLLHSKDLGFEVANADFGGMKALKVLAFTRFSYSWHVYQWGLTSVSSLSIPQSIKSLTSLGALCLRGYTLGDISILGTLKGLEILDLRGSSFDELPAGIAELKKLKLLDLFNCSIAKNNPYEVIERISQLEELYIWTTRHHSLENVSFPTLQRYAIGCTTRAIYSFSSNPYEFLEKHMPARALCLEDFDVSSPNHSSSSIKDLLPRAESLHLRYLNGGYKNIIPSVDKSGMNHLVGLILESCSEIECLVDSNRNTNPHMNLFPKEAVFSELVAIRLQHMNRLEEVFRDPSSLCSLKNLQEVIANYCPRLYSISFPMNSNLSSLKILRLERCEMLMSSIFTPSIAQTLVLLEHINICECKRLKHIISEAEEEEIVDYSLKMFPSLRILSVEGCESLESIFPIYFAKGLERLEDVVISRNPKLKYVFGTHKEDQIVMDIDLPSLRRITLNSLTSLINIYPKYCRPRSPNLKVCRYENCMELSTNAVHNMVVRSDIRQDHKATKERDIFWMADAPSVQWCNQDIPPALRDLLKFQVKEGSDSNREIEPLNSNLENLNLQDLSELQFIWNCLPKFLILQKLRFVNLHTCPKLKDIFSLTIVKSLPKLESLKISNCEELEEIVSSDSDKAENHLNQSVCFPELRYLEVLKCNKLKSLFNGFMASHFPKLATLKIARCSQLDHAFRLEPKANHEGRGSGRKATDPKQVVFPKLGEIELVCLLNFTKICQGFKLQQPLKSYKVQDCPKYTSSTSTYKG 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02704 1271 Coils Coil 65 85 - -
Bva12g02704 1271 Gene3D Ribonuclease Inhibitor 678 1001 IPR032675 -
Bva12g02704 1271 PRINTS Disease resistance protein signature 238 252 - -
Bva12g02704 1271 PRINTS Disease resistance protein signature 620 636 - -
Bva12g02704 1271 PRINTS Disease resistance protein signature 331 345 - -
Bva12g02704 1271 PRINTS Disease resistance protein signature 166 181 - -
Bva12g02704 1271 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 20 945 - -
Bva12g02704 1271 Gene3D Ribonuclease Inhibitor 1033 1205 IPR032675 -
Bva12g02704 1271 Gene3D Ribonuclease Inhibitor 497 677 IPR032675 -
Bva12g02704 1271 PANTHER - 1053 1262 - -
Bva12g02704 1271 PANTHER - 20 945 - -
Bva12g02704 1271 Gene3D - 383 466 IPR036388 -
Bva12g02704 1271 SUPERFAMILY RNI-like 1067 1196 - -
Bva12g02704 1271 SUPERFAMILY L domain-like 456 1000 - -
Bva12g02704 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 398 IPR027417 -
Bva12g02704 1271 Gene3D - 296 382 IPR042197 -
Bva12g02704 1271 Coils Coil 30 57 - -
Bva12g02704 1271 Pfam NB-ARC domain 150 384 IPR002182 GO:0043531
Bva12g02704 1271 Gene3D - 135 292 IPR027417 -
Bva12g02704 1271 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1053 1262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02704 Bva-Chr12 19777539 19783316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02704 167 640 WRKY Transcription Factor Family AT5G45050 23.978 1.10e-13 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02704 - - gmx:102662074 1152.89