Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02694 ATGGCAGCATCAGTATATGGCGATCGAAGTGCTTTCTATGACTGTACATTTCAAGGAGTGCAAGATACCTTGTGGGATGTAAATGGCCGCCATTACTTCCACAAGTGCAATATTCAAGGTCAAGTTGATTTCATATGGGGAAATGGCCAATCCATATATGAGCTTATCCTTATTTCCAATGTTTACGAAGCCTTAGGTTGTGTTGATCTTCGAGCAACAACTATTGCTGTTAGTCAGTCTGGAAGACCAGGAACCTTCAAAACCATTCAAAGTGCAATTGATTCTGTCCCTTCAAAGAACAATCGATGGGTTCGTGTCCTAATTCCTGCTGGGGTTTATAGGGAAAAAGTTCAAATCCCCATAGACAAGCCCTGCATTTTTCTTCAAGGAGCTGGGAGCAAATCCACCATCATTGAGTGGGGTGATTTTGCCAATGCCACCTTAACGGCTTCAGCAAGTGATTTTGGAGCGAAGACAATTACATTCAGGAATACATACAACCTTCCGCCTACATCAGCAGAAGATGAGATTAAATATGGCCTAGAAAGACGACCAGCAAATGCAGCATCAGTATATGGTGATCGAAGTGCTTTCTTTAACTGTATATTTCAAGGAGTGCAAGATACTTTGTGGGATGCAGATGGCCGCCATTTCTTCCACAAGTGCAATATTCAAGGTGAAGTTGATTTCATATGGGGAAATGGCCAATCCATTTATgagCAATGTGTGAATCAATATGTGGAGAATTCTCATGGGTTCACTAGTTACATAACAGCACAAGGAAGAGAATTCATGACCGAAACAAGTGGGTTTGTGTTCAAAGAGTGTAAGATAACGGGGAATGGAAAAGCATACCTTGGGAGAGCTTACAGAGCTTTTTCCAGAGTTATTATTGCTAACTCAGTTCTAACCAATGTGGTTTATCCCGTTGGTTGGTATGCTTGGGATCATGTTGGCCATGAAGCAAACTTGACGTATGTGGAAGAGGGCAACACTGGATG 1001 0.4186 MAASVYGDRSAFYDCTFQGVQDTLWDVNGRHYFHKCNIQGQVDFIWGNGQSIYELILISNVYEALGCVDLRATTIAVSQSGRPGTFKTIQSAIDSVPSKNNRWVRVLIPAGVYREKVQIPIDKPCIFLQGAGSKSTIIEWGDFANATLTASASDFGAKTITFRNTYNLPPTSAEDEIKYGLERRPANAASVYGDRSAFFNCIFQGVQDTLWDADGRHFFHKCNIQGEVDFIWGNGQSIYEQCVNQYVENSHGFTSYITAQGREFMTETSGFVFKECKITGNGKAYLGRAYRAFSRVIIANSVLTNVVYPVGWYAWDHVGHEANLTYVEEGNTG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02694 333 Gene3D - 1 68 IPR012334 -
Bva12g02694 333 PANTHER PECTINESTERASE 72 333 - -
Bva12g02694 333 Gene3D - 69 333 IPR012334 -
Bva12g02694 333 SUPERFAMILY Pectin lyase-like 2 54 IPR011050 -
Bva12g02694 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 72 333 - -
Bva12g02694 333 Pfam Pectinesterase 75 333 IPR000070 GO:0030599|GO:0042545
Bva12g02694 333 Pfam Pectinesterase 2 54 IPR000070 GO:0030599|GO:0042545
Bva12g02694 333 SUPERFAMILY Pectin lyase-like 72 333 IPR011050 -
Bva12g02694 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 59 - -
Bva12g02694 333 PANTHER PECTINESTERASE 2 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02694 Bva-Chr12 19738977 19742749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02694 1 54 Carbohydrate Esterase AT2G19150 51.852 3.47e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02694 - - qlo:115970350 283.493