Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02688 ATGGATGCCACGCCGAGCTCTGAGCTAACAGAACCGGTGGTGGATGGCTCGCCGGCTTCTGAGAAAAGGCCGATTGAGAATGGCGGAGGTGAGGAATTGGGTGACCGGTCTAGTAAGAAGGCTAAAGTGGGGGACAGTGGGGAATTGAAGAGGGTGGCGGAAATTGTGTTGGTTTTGTCCACAATGGCCGCAATGAGGGGTGGGAAGAAGCCGACTGATGTGGAGAATGAGCTGATGATGGAGGCTCGGGCCAAGTTAGCGGATTTGTGCCAAGGGTTGGCTCCAAAGGATATTGTGGCCAGGGAAGCTATTGGGACTGTGATTGAGGATCTGGGGTTGAATGGGAAGGTCAAAGACCAGAGATTAGGGTTTAGAGCTCCCAAGATGTCGATATCTGAGAGATTTTCACACGCAAAGTGGAAGATGGAAGAAGCAAAGAAGTATTCTGCACATTCTGCAACGTATTCATCTCAACCATTGCAAACAAGCACTAGCGGAACTGTTGAAAACCGCATGCCATCCCATGCTGTTCGTATGTTTCCATCAGACAAATCAAGCCATGCAGCAATCTCTTCCGCATCTACCCTAGCTTCTACTCCTGTATCTCAGGTTTCTTCAGCTTTGCACTATCCATCATCCAGCAATGAAATAAGAGCGCCTATAGTTACTAGTGGAATGCCAAGCAATCACTTGGGAAGAAATTCATCCTCCTTGACATTGCCAAAAACTGAACAACCACAGTTCAAAGCTGATGGAGGATCAAATGGCTCTCCTTATATGTTACAAGTTCAAGCAAATTCTTCAGCAAACCAGCCTAATGCTCCAACATGGTCAATACAGAGCCAATCTGCGACGTCAGCTAGAACTGGACCAGATAATAAGGTACCTGGTCATACTTCTGTCAAGGTTGAGGGGACAGGTAACCTTACTGTGTCAAGGGCAGCTCCGCAAATACCTAGAGATCAAAGCTTTAGACCTTTCATCACCCAAACAGCACCCGGGAATTTGTCAACTGTGCACCAGCCATTGCAGGGAATGAACATTGTCCAGCCACCTTCCGTTACTAATAATCACACtgaaattgcaaagattgtCCAGAAATTTTTACAACCTAAGCTTCCTGAACATCCCACATGGACTCCTCCATCAAGGGATTATATGAGTAAGGCTACAACTTGCCAAATGTGTGAGCTCACTGTCAATGAGGTGGATACTGTGCTTCTGTGTGATGCTTGTGAGAAAGCATTTCACTTGAAGTGCTTGCAGTCATTGAGAGGAATTCCTAGAGGTGAGTGGCACTGCATGAGGTGCTTGACTTTAAGTAATGGAAAGCCTTTGCCTCCAAAATATGGCCGTGTAATGAGATCATCAAACATGCCAAACACACCACCAAAAGTGCCCTCCAATACTGGTGGAATTCAAGCTTCTTTGGAGAGGAAAGCAGGAGTATTAGATACAAAGGTTGGTCAGGAGAAGCTGACAACAAATGGGAGCTCTGCTCCAACTAGAACCACTGGTAACAGCTCTACTGAGCTGCCATCTGACTCTAAGACCCTAGTTGCAAGAGATATACAAGGGGACAGCATAACATCCAGCTCTAAACATATAGGTGAGAAGCCTGGTCCAAGCATATCAACAAAATCCCTTGATGGAGCTTCTAATTCTTCTGCTAGCATACCAGGTGAAATTTCTtctcaacaaataaaaaattctgagGCATTTGCCTGTCAAGAGGGAGAAATCACTTCAGAAACAGAGACTCCCCCTAAATTATCTGTGCAGATTCTACAAGATGAGCAGACAGTGTTGCAAGACGATGCTGAAGGATCATCATATAAGCTCCCTGATGATAGTTTGATTTATAATAACCAAAAGGAATCTCTTGGAGAAGGTTTGAGATATGATATCCAACGAGATAGCAAAGATGTCGCACTTGGTAACTCTGGAAGTTCTGGAACTAGCACTGATGGTAGACAGCACTCTCAACTACCCACAAACGGGTCACATGTACAATGGATTGGTGATGTTATACAAGTTGTGGATGAGAAAAAGTTTTACCAATCTTGCTGTGTTGATGGAGTAACATATAGACTGAAGGATCATGCTCTTTTTATTTCCAACCTTGGACAATTAGAACCTTCTAAACTTCAGTCTATGTGGGAAGATAGCAAAACTGGGTTAAAGTGGGTTAATGTGACAAAATGCTACTTTCCTGGTGATTTACCTGGGAATATTGCCCATCCATGTATTTCTGAAGTCAATGAgGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTGCCTCAATTCGGGGTCCATGTGGAGTCCTCCcttctaataaatttaaacaagaaaCAGACAGACGAAATCAGTTAGGGCTTGAGGCAAGTGCTAGACTACATCCAATTTTCCTTTGCAGATGGTTCTATGATGAACTCAAAAAGTTATTTCAGCCTGTTACCAGTTA 2468 0.4335 MDATPSSELTEPVVDGSPASEKRPIENGGGEELGDRSSKKAKVGDSGELKRVAEIVLVLSTMAAMRGGKKPTDVENELMMEARAKLADLCQGLAPKDIVAREAIGTVIEDLGLNGKVKDQRLGFRAPKMSISERFSHAKWKMEEAKKYSAHSATYSSQPLQTSTSGTVENRMPSHAVRMFPSDKSSHAAISSASTLASTPVSQVSSALHYPSSSNEIRAPIVTSGMPSNHLGRNSSSLTLPKTEQPQFKADGGSNGSPYMLQVQANSSANQPNAPTWSIQSQSATSARTGPDNKVPGHTSVKVEGTGNLTVSRAAPQIPRDQSFRPFITQTAPGNLSTVHQPLQGMNIVQPPSVTNNHTEIAKIVQKFLQPKLPEHPTWTPPSRDYMSKATTCQMCELTVNEVDTVLLCDACEKAFHLKCLQSLRGIPRGEWHCMRCLTLSNGKPLPPKYGRVMRSSNMPNTPPKVPSNTGGIQASLERKAGVLDTKVGQEKLTTNGSSAPTRTTGNSSTELPSDSKTLVARDIQGDSITSSSKHIGEKPGPSISTKSLDGASNSSASIPGEISSQQIKNSEAFACQEGEITSETETPPKLSVQILQDEQTVLQDDAEGSSYKLPDDSLIYNNQKESLGEGLRYDIQRDSKDVALGNSGSSGTSTDGRQHSQLPTNGSHVQWIGDVIQVVDEKKFYQSCCVDGVTYRLKDHALFISNLGQLEPSKLQSMWEDSKTGLKWVNVTKCYFPGDLPGNIAHPCISEVNEVYESNSDRTEMAASIRGPCGVLPSNKFKQETDRRNQLGLEASARLHPIFLCRWFYDELKKLFQPVTS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02688 822 MobiDBLite consensus disorder prediction 219 293 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 489 539 - -
Bva12g02688 822 Gene3D - 672 822 IPR043151 -
Bva12g02688 822 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 350 445 IPR013083 -
Bva12g02688 822 CDD BAH 693 821 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 484 566 - -
Bva12g02688 822 ProSiteProfiles Zinc finger PHD-type profile. 390 440 IPR019787 -
Bva12g02688 822 SMART PHD_3 392 438 IPR001965 -
Bva12g02688 822 MobiDBLite consensus disorder prediction 454 473 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 1 45 - -
Bva12g02688 822 ProSitePatterns Zinc finger PHD-type signature. 393 437 IPR019786 -
Bva12g02688 822 MobiDBLite consensus disorder prediction 455 473 - -
Bva12g02688 822 SUPERFAMILY FYVE/PHD zinc finger 384 447 IPR011011 -
Bva12g02688 822 MobiDBLite consensus disorder prediction 25 45 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 546 566 - -
Bva12g02688 822 ProSiteProfiles BAH domain profile. 694 821 IPR001025 GO:0003682
Bva12g02688 822 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 10 821 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 219 303 - -
Bva12g02688 822 MobiDBLite consensus disorder prediction 643 667 - -
Bva12g02688 822 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 10 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02688 Bva-Chr12 19696809 19701977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02688 406 437 PHD Transcription Factor Family AT2G36720 59.375 1.63e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02688 - - gmx:100807139 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02688 12 19696809 19701977 Bva12g02688 12 19696809 19701977 ECH