Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02683 atGGGTATTGGTGAAGAAATCCAAAGGTTCATCAAAGTATGGATCACAGCCATTTCGTGTCTTGGTTATTGCTATTATATAGCTGCAAGAATACCAAAGGGCTTGTTGAGGCTTTTCTCCCTCATTCCCATCATTTACCTCTTCCTTGTCATACCCTTCGATCTCTCATCACTCCATCTTGGTGCATTCACagtcttcttcctttcttggCTTGCAAGTTTCAAACTCCTCCTTTTCTCATTCAATCAAGGCCCTTTATCACAATCTCATCTAAACATCTTGCATTTTATATGCATAGCTTCTCTTCCCATTAAGCTCAAACAAGACCCACCTTCAAAATCTACCACAAATTCAGAATCCCATGATAATGGTTCGTCTCCATTTGCCAAATTGGTTTCAGTGTGCATTAAATTGCTTTTCTTGGCTATGGTAATCTGCTGTTATGACTACACAGAGAATTTACACCCTCGTTTCTTCTTGGCAATCTTATTTTGCCACATGTACCTTTCCATAGTGATTGCCCTAGATCTTTGTAAAATGTCAGATGGATGTATTTTTGGGTTTGAGATAGAGCCACAGTTCAACAAACCCCATCTTGCCACTTCACTTCAAAATTTCTGGGGTCGTAGGTGGAACCTCATGGTTTCAGATGTTCTACGTGCCGCCATCTACCACCCACTACGCCGCCTACTCACACATCCCATAGGCCCGACATGGGGTCTGCCGGCGGCCATATTTGCCACATTTGTTGTTTCCGGTGTGATGCAtgagtttatatattattatcttgCACGAGCGCCTCCCACGTGGGAAGTCACGTGGTTCTTTGTCCTATATGGCGCGTGCACGGCCATTGAGGTGGCGGTGAAGAAGGCCGTGGTGCACCGTGGATGGAGGTTGCACCGGCTACTGTCATGGTCGCTTACGGTTGCATTTTTGGTGGTTACAGGCGAGCGGCTATTTTTCAATCAGCTATTAAGGAATGGTGTCCTTGAAAGAGCAATGAGGGAATATGCAATTGTGCTAGACTTTGTCAAGTCCAAATCGCCATCATCGTACCCTGTTCTGTCAAACCCTCAAGAAAGTAGCTCCTTTCGTAAAGGACCAATGGCATCTTCAGACTCATGGATGAAGGAATATAATGAAGCCCTAAAACTTGCTGATGATATTAGTGGCATGATTTCTGAGCATAGTTCTTTTCCTGGATCTGGACCTGAAACCCAGCGCCATGCATCTGCTATTAGAAGAAAGATCACAATATTGGGGACAAGGCTTGATAGCTTGCAATCCCTTTTGTCAAAGCTTCCTGGAAAGCAGCCTATATCTGATAAAGAGATGAATCGCCGCAAGGACATGCTTGGAAATTTAAGGTCAAAAGTTAACCAAATGGCTTCCGCATTGAACATGTCGAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAATAAAACCAGATGATGCAATGAACAGAATTGCTGGCCTAGACAACCAGGGAGTTGTTGGATTTCAACGACAAGTTATGAAAGAACAAGATGAGGGGCTTGAGAAATTGGAGCATACTGTAATAAGTACAAAACATATTGCATTGGCAGTGAATGAAGAACTGGATCTACACACTAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTACGGCGAGTGCAGAAGAACTTGGCAATTTTGAATAAACGTACGAAGGGTGGTTGCTCCTGCTTGTGCCTGCTTTTATCAGTTGTTGGCATAGTAGTTTTAATTGTTGCCATATGGCTGTTGATCAAATATTTGTG 1805 0.4255 MGIGEEIQRFIKVWITAISCLGYCYYIAARIPKGLLRLFSLIPIIYLFLVIPFDLSSLHLGAFTVFFLSWLASFKLLLFSFNQGPLSQSHLNILHFICIASLPIKLKQDPPSKSTTNSESHDNGSSPFAKLVSVCIKLLFLAMVICCYDYTENLHPRFFLAILFCHMYLSIVIALDLCKMSDGCIFGFEIEPQFNKPHLATSLQNFWGRRWNLMVSDVLRAAIYHPLRRLLTHPIGPTWGLPAAIFATFVVSGVMHEFIYYYLARAPPTWEVTWFFVLYGACTAIEVAVKKAVVHRGWRLHRLLSWSLTVAFLVVTGERLFFNQLLRNGVLERAMREYAIVLDFVKSKSPSSYPVLSNPQESSSFRKGPMASSDSWMKEYNEALKLADDISGMISEHSSFPGSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKEMNRRKDMLGNLRSKVNQMASALNMSNFANRDSLLGPEIKPDDAMNRIAGLDNQGVVGFQRQVMKEQDEGLEKLEHTVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCLLLSVVGIVVLIVAIWLLIKYL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02683 601 SUPERFAMILY SNARE fusion complex 496 566 - -
Bva12g02683 601 SMART tSNARE_6 500 567 IPR000727 -
Bva12g02683 601 Gene3D - 507 569 - -
Bva12g02683 601 PANTHER ACYL-COA--STEROL O-ACYLTRANSFERASE 1 5 347 - -
Bva12g02683 601 CDD SNARE_Qc 508 565 - -
Bva12g02683 601 Pfam SNARE domain 542 592 IPR000727 -
Bva12g02683 601 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 505 567 IPR000727 -
Bva12g02683 601 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 5 347 IPR044851 GO:0006629|GO:0008374
Bva12g02683 601 Pfam Membrane bound O-acyl transferase family 191 277 IPR032805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02683 Bva-Chr12 19672464 19678850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02683 371 601 SNARE and Associated Proteins AT1G16240 74.459 9.69e-126 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02683 - K08503 gmx:102667540 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02683 12 19672464 19678850 Bva12g02683 12 19672464 19678850 ECH