Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02677 ATGATGGCTATGGTTCCAGACGTGGTGAGAAATCTAGCTCACGAGCACCAACAGGTGATACCCATATCAGTTTTCGTGGCGGTTCTCTGCCTTTGCTTGCTCATAGGTCACTTGCTCGCAGAAAACCGTTGGGTCAATGAATCTATCACTGCCATTCTAGTTGGATGTATGGCTGGAATAATAATCTTGGTGCTGACCAAGGGGGAAAGTTCTCACATCCTTACGTTTGATGAAGAACTCTTCTTCATATATCTCCTTCCACCCATAATATTCAATGCTGGATTTCaggtgaaaaagaaacagttCTTCCATAACTTTTTCACCATCATGCTATTTGGGGTGATTGGTGTTTTCATCTCTACAACTATTATTACAGCAGGCAGCTGGTGGCTATTCCCTAAGTTGAACTTTCTAGGTCTGACGGGACGGGATTATCTTGCTATAGGAACAATTTTCTCATCAACTGATACAATTTGTACTCTCCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCATAGTTTTTGGAGAAGGAGTGGTAAATGATGCTACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTAGATGTTTCAAGGTTTAACGGTAGGACGCTCCATGTTGTCCTAGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTCGGTGTCACTGCTGGACTTCTGACAGCATATATTCTGAAAACCTTTAGCTTTGGAAGACATTCAAGTATCCGTGAAATTTCCCTAATGGTTTTGATGGCATATCTATCCTATATGTTGGCAGAGCTACTAGAACTAAGTGGAATTCtcactgttttcttttgtggaaTATTGATGTCTCATTATGCATGGCATAATGTGACTGAAATTTCAAGAGTCACAACCagGCATGTGTTTGCAACAATGTCATTCATTGCAGAAACATTCATATTTCTTTATGTGGGCATGGATGCTCTTGACATTGCAAAGTGGAGAATGACCAACTTAAGTTTTGGTAATTTGATGGGTATTTACAGTTGCTTGCTCCTACTGATATTGCTTGGACGTGCCATGTTTGTTTTCCCTCTCTCTGCTTTTTCCAATTATATGAATAGGCGTGCCGAGAGAACATCAAATATCACACTCAAACACCAGATAATCATTTGGTGGGCTGGACTTATGAGAGGAGCAGTCTCTATTGCCCTGGCTTTCAAACAGTTCACATACTCTGGCGTTACATCTGACCCGGCGAAGGCAACAATGATTACCAACACCATTGTTGTTGTCCTCTTCAGCACACTGGTGTTTGGTTTTTTCACAAAACCACTTATTAGCTATCTGCTTTTTCATCAAGCAACAAGAAGAAACATCAGCCGTGAAGAATCAGGTCCTCCCATTGAAGACTTGAATCTGCCTTTGCTATCCCTTGAAAAGTCAGCCGCGGTCAACTTAAGCCGTGCAAAGCAAAGTTTTTCCATGTTTATGGAAAGTCCTATATACACTATACATCACTACTGGAGGAGATTTGATGATGCCTACATGAGACCTATTTTTGGGGGTCCTATCACCAACCACTCACAATCCTA 1571 0.4029 MMAMVPDVVRNLAHEHQQVIPISVFVAVLCLCLLIGHLLAENRWVNESITAILVGCMAGIIILVLTKGESSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFFTIMLFGVIGVFISTTIITAGSWWLFPKLNFLGLTGRDYLAIGTIFSSTDTICTLQVLHQDETPLLYSIVFGEGVVNDATSVVLFNAVQKLDVSRFNGRTLHVVLDFLYLFSTSTALGVTAGLLTAYILKTFSFGRHSSIREISLMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTEISRVTTRHVFATMSFIAETFIFLYVGMDALDIAKWRMTNLSFGNLMGIYSCLLLLILLGRAMFVFPLSAFSNYMNRRAERTSNITLKHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPAKATMITNTIVVVLFSTLVFGFFTKPLISYLLFHQATRRNISREESGPPIEDLNLPLLSLEKSAAVNLSRAKQSFSMFMESPIYTIHHYWRRFDDAYMRPIFGGPITNHSQS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02677 523 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva12g02677 523 Pfam Sodium/hydrogen exchanger family 26 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva12g02677 523 Gene3D - 141 193 - -
Bva12g02677 523 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 - -
Bva12g02677 523 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva12g02677 523 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva12g02677 523 PRINTS Na+/H+ exchanger signature 149 159 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva12g02677 523 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02677 Bva-Chr12 19649367 19654095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02677 8 516 Antiporters AT5G55470 71.735 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02677 - - gmx:100813332 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02677 12 19649367 19654095 Bva12g02677 12 19649367 19654095 ECH