Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g02673 | ATGCTGCAGGCCCACCTTCCTATATATAATGCATTCAGTACACTGAAAGAACCTCGCCTTGTGGCGAGGAAGTTCTTGGCCAGACCTCAACATGAAGGTGCAGGGGCTGTTGTTAGGAGAAGCATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTTCTTGTCTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCCGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGCGCTGTCACTCATGAAGACTTTGAAGGACATAAGGGAACAATAGAAGCTGGTGACTTGCAGTGGATGACTGCAGGAAGAGGGATAGTTCACTCAGAAATGCCTGCAGCTCAAGGTACCCAAAAGGGTCTGCAGCTGTGGATCAATCTTgcttccaaagataaaatGATTGAGCCAAGGTATCAAGAGATGTTGAGCAAGGACATAGTAGAAGCTGTGGAAGATGGCATCAAGGTTAGAGTAATAGCAGGAGAAGCACTAGGAATAAAGTCTCCAATATACACAAGGACTCCAACCATGTACTTGGACTTCACTCTCAAACCAGGGGCTTATCTACAACAACCAATACCAAAAACTTGGAATGCATTTGCCTATGTATTGGAGGGGGAGGGCGTGTTTGGCAACCTAAGATCTCAGCCAGTAGCATCCcatcatattcttcttctgggtCCTGGGGATGGCTTGGAGGCATGGAACAAATCTTCTAAGGTGCTTAGGTTCATTCTTGTTGGAGGTGAACCACTGGGTGAGCCTGTTAAGCAGTTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGACTTTGAGAATTTTGCCAACGGGTTTGAGAAAGCAAGACAATGGAGGTCTGAAGCAGCAGTTGGTTTTGGATTTTA | 920 | 0.4391 | MLQAHLPIYNAFSTLKEPRLVARKFLARPQHEGAGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKDKMIEPRYQEMLSKDIVEAVEDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGAYLQQPIPKTWNAFAYVLEGEGVFGNLRSQPVASHHILLLGPGDGLEAWNKSSKVLRFILVGGEPLGEPVKQFGPFVMNTQEEIDQTIDDFENFANGFEKARQWRSEAAVGFGF | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g02673 | 306 | SUPERFAMILY | RmlC-like cupins | 19 | 298 | IPR011051 | - | |
Bva12g02673 | 306 | CDD | cupin_pirin_C | 181 | 257 | - | - | |
Bva12g02673 | 306 | Gene3D | Jelly Rolls | 32 | 284 | IPR014710 | - | |
Bva12g02673 | 306 | Pfam | Pirin | 38 | 131 | IPR003829 | - | |
Bva12g02673 | 306 | CDD | cupin_pirin_N | 36 | 133 | - | - | |
Bva12g02673 | 306 | Gene3D | Jelly Rolls | 153 | 258 | IPR014710 | - | |
Bva12g02673 | 306 | PANTHER | PIRIN-RELATED | 8 | 303 | IPR012093 | - | |
Bva12g02673 | 306 | PIRSF | Pirin | 17 | 297 | IPR012093 | - | |
Bva12g02673 | 306 | Pfam | Pirin C-terminal cupin domain | 184 | 288 | IPR008778 | - | |
Bva12g02673 | 306 | PANTHER | - | 8 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g02673 | Bva-Chr12 | 19622509 | 19625196 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g02673 | 18 | 294 | Calmodulin-binding Proteins | AT3G59220 | 60.215 | 7.95e-129 | 367 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g02673 | K06911 | - | gmx:100790637 | 555.829 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva12g01092 | 12 | 10810442 | 10813195 | Bva12g02673 | 12 | 19622509 | 19625196 | BWGD | |
Bva12g02673 | 12 | 19622509 | 19625196 | Bva12g02673 | 12 | 19622509 | 19625196 | ECH |