Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02673 ATGCTGCAGGCCCACCTTCCTATATATAATGCATTCAGTACACTGAAAGAACCTCGCCTTGTGGCGAGGAAGTTCTTGGCCAGACCTCAACATGAAGGTGCAGGGGCTGTTGTTAGGAGAAGCATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTTCTTGTCTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCCGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGCGCTGTCACTCATGAAGACTTTGAAGGACATAAGGGAACAATAGAAGCTGGTGACTTGCAGTGGATGACTGCAGGAAGAGGGATAGTTCACTCAGAAATGCCTGCAGCTCAAGGTACCCAAAAGGGTCTGCAGCTGTGGATCAATCTTgcttccaaagataaaatGATTGAGCCAAGGTATCAAGAGATGTTGAGCAAGGACATAGTAGAAGCTGTGGAAGATGGCATCAAGGTTAGAGTAATAGCAGGAGAAGCACTAGGAATAAAGTCTCCAATATACACAAGGACTCCAACCATGTACTTGGACTTCACTCTCAAACCAGGGGCTTATCTACAACAACCAATACCAAAAACTTGGAATGCATTTGCCTATGTATTGGAGGGGGAGGGCGTGTTTGGCAACCTAAGATCTCAGCCAGTAGCATCCcatcatattcttcttctgggtCCTGGGGATGGCTTGGAGGCATGGAACAAATCTTCTAAGGTGCTTAGGTTCATTCTTGTTGGAGGTGAACCACTGGGTGAGCCTGTTAAGCAGTTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGACTTTGAGAATTTTGCCAACGGGTTTGAGAAAGCAAGACAATGGAGGTCTGAAGCAGCAGTTGGTTTTGGATTTTA 920 0.4391 MLQAHLPIYNAFSTLKEPRLVARKFLARPQHEGAGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKDKMIEPRYQEMLSKDIVEAVEDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGAYLQQPIPKTWNAFAYVLEGEGVFGNLRSQPVASHHILLLGPGDGLEAWNKSSKVLRFILVGGEPLGEPVKQFGPFVMNTQEEIDQTIDDFENFANGFEKARQWRSEAAVGFGF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02673 306 SUPERFAMILY RmlC-like cupins 19 298 IPR011051 -
Bva12g02673 306 CDD cupin_pirin_C 181 257 - -
Bva12g02673 306 Gene3D Jelly Rolls 32 284 IPR014710 -
Bva12g02673 306 Pfam Pirin 38 131 IPR003829 -
Bva12g02673 306 CDD cupin_pirin_N 36 133 - -
Bva12g02673 306 Gene3D Jelly Rolls 153 258 IPR014710 -
Bva12g02673 306 PANTHER PIRIN-RELATED 8 303 IPR012093 -
Bva12g02673 306 PIRSF Pirin 17 297 IPR012093 -
Bva12g02673 306 Pfam Pirin C-terminal cupin domain 184 288 IPR008778 -
Bva12g02673 306 PANTHER - 8 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02673 Bva-Chr12 19622509 19625196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02673 18 294 Calmodulin-binding Proteins AT3G59220 60.215 7.95e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02673 K06911 - gmx:100790637 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01092 12 10810442 10813195 Bva12g02673 12 19622509 19625196 BWGD
Bva12g02673 12 19622509 19625196 Bva12g02673 12 19622509 19625196 ECH