Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02661 ATGCCGAGTGTTAACCCTGACCCATTAGACAAAGATTCTGAACCATTTGTGGAAACTGATCCTACTGGGAGATATGGTCGATACAGTGAGCTTCTGGGTTCTGGTGCAGTGAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGCATAGAAGTGGCATGGAACCAAGTGAAGCTCAAGAACTTCACCTACGACCCAGCTATGGTGGACAGGCTTTACTCTGAAGTGCGATTGCTCAGAAGCTTGACCAACCAAAACATCATCACCCTTTACAGCGTTTGGAGAGATGAGGAGCATAACACTTTAAATTTCATCACTGAGGTCTGCACCAGTGGGAATTTGAGGGAGTATAGGAAGAAGCACAAGCAGGTTTCCATGAAGGCCTTGAAGAAGTGGTCTAGGCAGATTCTCAAAGGGTTGAATTACTTGCATTTGCATGACCCTTGCATCATTCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGAAACACGGGCCagGTTAAGATTGGTGACTTGGGTTTGGCAGCAACAGTGGGCAAGAATCACTCAGCACATTCAATTCTTGGGACACCGGAGTTTATGGCGCCGGAGTTGTACGATGAAAATTATACAGAACTGGTGGACATATACTCTTTTGGAATGTGTGTATTAGAGATGGTGACAGTGGAAATCCCTTACAGCGAATGTGACAGTGTTGCCAAGATATACAAGAAGGTGTGCTCAGGTGTGAGACCTCAAGCATTGAACAAGGTTAAAGATCCTGAGGTGAAGGCATTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGACCTTCTGCTGCTGAGCTTCTCAAGGATCCATTCTTCGATGAGATTGACGATGACGAAAACAATGACACTGATTGCTCATA 896 0.452 MPSVNPDPLDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLKNFTYDPAMVDRLYSEVRLLRSLTNQNIITLYSVWRDEEHNTLNFITEVCTSGNLREYRKKHKQVSMKALKKWSRQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAATVGKNHSAHSILGTPEFMAPELYDENYTELVDIYSFGMCVLEMVTVEIPYSECDSVAKIYKKVCSGVRPQALNKVKDPEVKAFIERCLAQPRARPSAAELLKDPFFDEIDDDENNDTDCS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02661 298 CDD STKc_WNK 24 284 - -
Bva12g02661 298 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
Bva12g02661 298 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02661 298 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g02661 298 MobiDBLite consensus disorder prediction 277 298 - -
Bva12g02661 298 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 297 - -
Bva12g02661 298 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02661 298 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Bva12g02661 298 MobiDBLite consensus disorder prediction 283 298 - -
Bva12g02661 298 PIRSF TyrPK_CSF1-R 27 131 - -
Bva12g02661 298 PIRSF TyrPK_CSF1-R 84 282 - -
Bva12g02661 298 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Bva12g02661 298 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02661 Bva-Chr12 19563349 19565377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02661 5 287 MAP Kinase Kinase Kinase AT5G55560 82.686 0.0 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva12g02661 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02661 K08867 - gmx:100818126 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00647 12 8254426 8257422 Bva12g02661 12 19563349 19565377 BWGD
Bva12g02661 12 19563349 19565377 Bva12g02661 12 19563349 19565377 ECH