Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02659 ATGGAGGCTGCAATCAACTCCGGCGGAAACCACTCGGCTTCGGAGCTCCGGATGGGGCCTTGCAATGAAGCGGCTTCGAATGATCTGAATCAATTTGGCCCAAGGAAGAGTTCCGACGCCGGAGCTGCCGGCTCAGCTGGTGGCGGTGGCGCTAGGTACAAGCTGATGTCTCCGGCAAAGCTTCCGATCTCGAGGTCGCCTTGTATCACGATTCCGCCGGGTCTGAGTCCGTCGTCGTTTCTCGAGTCCCCGGTGCTTCTTTCTAACATGAAGGTGGAGCCTTCGCCAACTACTGGGTCCCTTGCTAAGCCTCTAACAGTACATGGTTCTGTTGTTTCTGCTGCATTTCCTGTAACCACTGTATGCTTCAATTCCAATACTGTTGATGACCGAAAATCTGGCTTATTTGAGTTTAAACCACACGGTAGATCAAATATGGTTCCCACAGATTTCAACAACCGTTCAAGTGAACAATCTATGCAAATAGAAGGTCCAGGAAAAGCTTCATTTGCCACATCAGCATTAGTTAAAAGTGAGATAGTGGTTCCCTCAAATGAATTAAGTCTATCATCACCTGGTAAAATGGTTACTTCTGTGGGTAGTGCTCCTGTTGAAGTCAATTTGGATGAATTTAACCACAGAGGCAACACAGCCACAGGACTTCAAGCATCACAAAATGATGCTAGAGGAAGTGTCCTTTCAGTTGCAGCTGAAAGAGTATCTGATGATGGATATAATTGGCGAAAATATGGACAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAATGTACACATCCTAACTGTGAAGTCAAGAAACTATTTGAACGATCTCATGATGGACAAATTACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAGCCAAGCCGACGATACTCCGCTGGTACTGTTATGTCTATGCAAGAAGAGAGATCTGATAAGGCTTCATCTTTGGCTGGCCAAGATGACAAAGCATCCAATCTGCATGGTCAGGTATCTCATACTACCGAGCCCAACAGTACTCTGGAGCTATCTCCTGTAGTAGGAAATGATGATAGTCCAGAGGGTGCAGGGTTAGTGTCAAATAGAGGTAATGATGaggttgatgatgatgatctcTTCTCAAAGCGAAGGAGAATGGACATTGGAAATGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAACCTCGGGTGGTCGTACAGACTCTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGACAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATTACCACATACGAGGGTAAACACAACCATGATGTACCCACTGCAAGGAGTAGCAGCCATGACACAGCGGGACCAGCAGCGGCCGGTGGACAGACAAGAATTAGATCAGAAGAAAGTGATACCATTAGCCTCGACCTTGGAATGGGCATCAGCGCAGCTGCTGAAAATAGATCAAATGGGCAAGGCCAAATGCTGCTCCCAGAATTTGGTGCCGGTCAAACTCATACCGGCAATTCCAATTTCAGGTTTGTTCATACAAACCCGGCTCCAGCATACTTCGGCGTTCTAGGTAACGGCTCAAATCCATTTGGTTCAAGAGAAAACTTGAGGAATGAGGGTCCATCATTAAACCATGCCTCTTATCCATGCCCGCAGAACATTGGAAGAATACTAACGGGTccata 1796 0.4577 MEAAINSGGNHSASELRMGPCNEAASNDLNQFGPRKSSDAGAAGSAGGGGARYKLMSPAKLPISRSPCITIPPGLSPSSFLESPVLLSNMKVEPSPTTGSLAKPLTVHGSVVSAAFPVTTVPTDFNNRSSEQSMQIEGPGKASFATSALVKSEIVVPSNELSLSSPGKMVTSVGSAPVEVNLDEFNHRGNTATGLQASQNDARGSVLSVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSAGTVMSMQEERSDKASSLAGQDDKASNLHGQVSHTTEPNSTLELSPVVGNDDSPEGAGLVSNRGNDEVDDDDLFSKRRRMDIGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAAGGQTRIRSEESDTISLDLGMGISAAAENRSNGQGQMLLPEFGAGQTHTGNSNFRFVHTNPAPAYFGVLGNGSNPFGSRENLRNEGPSLNHASYPCPQNIGRILTGP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02659 572 Gene3D WRKY domain 202 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 Gene3D WRKY domain 376 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 ProSiteProfiles WRKY domain profile. 210 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 SUPERFAMILY WRKY DNA-binding domain 211 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 SMART WRKY_cls 391 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 SMART WRKY_cls 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 Pfam WRKY DNA -binding domain 392 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 Pfam WRKY DNA -binding domain 216 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 39 109 - -
Bva12g02659 572 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 117 551 - -
Bva12g02659 572 ProSiteProfiles WRKY domain profile. 386 451 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 SUPERFAMILY WRKY DNA-binding domain 383 451 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g02659 572 MobiDBLite consensus disorder prediction 1 49 - -
Bva12g02659 572 MobiDBLite consensus disorder prediction 447 475 - -
Bva12g02659 572 MobiDBLite consensus disorder prediction 266 352 - -
Bva12g02659 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 109 IPR044810 GO:0003700
Bva12g02659 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 117 551 IPR044810 GO:0003700
Bva12g02659 572 MobiDBLite consensus disorder prediction 280 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02659 Bva-Chr12 19548477 19554027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02659 56 572 WRKY Transcription Factor Family AT4G26640 55.898 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g02659 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02659 - - gmx:100816583 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01104 12 10861170 10867368 Bva12g02659 12 19548477 19554027 BWGD
Bva12g02659 12 19548477 19554027 Bva12g02659 12 19548477 19554027 ECH