Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02656 ATGGAAACTTCtcagaaacataaaatttcatatggCTCTGGGAGTTTCTACATTGAGTCTGTGCAAAATGTGGAATCATATGGCCCGCCTCCAACTCAGAACCCAGACAATTACTCATCGTCTGATAACAGCAGCCAAGCAAACTATCCTTCCATTCAGACTTTAGAACAATATTGCACCATTGATTCTTCAACCAGTGGTTTTCCTCATCAGAATTCTCCATCTACTACCTCGCCTAATGATAGCCCCGTATCAAAGCTAGAGTCAAAATCATATATGTTGAGGCCACAACACTCTCTTGAAATTATTCATGGCTCGCCAGAGAATGAGTCTTGCTTGACACATGACCTTGATGATCTGAGGCACAAGATAAGAGAACTTGAAACTGCCATGCTAGGACTTGATGGAGATATTCCAGGCACATATGATACTGTAATTCCAGGAGAATCTGATCAAATTTTGTCAGACACTGAGaagtggaagaaaatgatggaGATGATATCTAGGGGGGATTTGAAAGAGATGCTTTGTTCTTGTGCACAAGCAATAGCAGGAAATGATTTGGAGACAACTGATTGGTTGATGCCAGAGTTGCGTAAAATGGTTTCCATTTCTGGCAGTCCAATCCAACGATTGGGGGCATACATGTTGGAAGGTCTTGTTGCTAGGCTTGCCTATTCAGGAAGCACAATCTGCAAGGCCTTAAAATGCAAAGAGCCTACTGGTAACGAACTTCTTTCCTACATGCATGTACTTTATGAAATCTGCCCATACTTCAAGTTTGGATTTATGTCAGCAAATGGAGCAATTGCTGAAGCCATGAGGGACGAAAATAGAGTccatataattgattttcagATTAACCAGGGCAGCCAGTGGGTAAGCCTAATCCGGGCTCTTGCCGGCCGGCCGGGTGGACCCCCAGTGGTCAGAATAACAGGTGTGGATGACTCCACCTCAACTTATGCCCGGGGAGGAGGGCTTGATATTGTGGGGAAAAGGTTATCATTACTTGCACAGTCATGTAATGTACCTTTTGAGTTTCATGCTGTTGAAGTTCCTGCTTTTGAGGTGCAATTTGAAGACCTTGAAATTCGGCCTGGTGAAGCTGTTGCAGTGAATTTTGCCTTGAGTTTGCACCATGTGCCAGATGAAAATGTGGATGATCAGAATCATCGTGACAGGTTGTTGAGAATGGTGAAGCACTTGTCTCCAAAGGTTGTGACTCTTGTTGAGCAAGAATGTAATACCAGCAACGTTCCATTCTACCCGCGTTTCATTGAAACATTGAATCATTACTTGCCTGTTTTTGAATCAATTGATGCTGTCCTGCCGAGGGAGCACAAGGAGAGGATAAATGTGGAACAGCACTGCTTGGCTCGAGAAGTTGTCAATTTGATAGCTTGTGAAGGGGCTGAAAGAGTGGAGCGTCATGAGCTTCTGAAAATGTGGAAATCACGCTTCACGATGGCTGGATTAACACCTATTCCGTTGAGCTCCTTTGTCAATTCTACCATCAAGAGTCTCCTAAAGAGCTACTCTGAAAATTATACTCTAGAAGAGAGTGATGGTATTCTATATCTTGGTTGGATGAATCAAGTTCTTATTGCCTCTTGTGCTTGGAGGTG 1628 0.4214 METSQKHKISYGSGSFYIESVQNVESYGPPPTQNPDNYSSSDNSSQANYPSIQTLEQYCTIDSSTSGFPHQNSPSTTSPNDSPVSKLESKSYMLRPQHSLEIIHGSPENESCLTHDLDDLRHKIRELETAMLGLDGDIPGTYDTVIPGESDQILSDTEKWKKMMEMISRGDLKEMLCSCAQAIAGNDLETTDWLMPELRKMVSISGSPIQRLGAYMLEGLVARLAYSGSTICKALKCKEPTGNELLSYMHVLYEICPYFKFGFMSANGAIAEAMRDENRVHIIDFQINQGSQWVSLIRALAGRPGGPPVVRITGVDDSTSTYARGGGLDIVGKRLSLLAQSCNVPFEFHAVEVPAFEVQFEDLEIRPGEAVAVNFALSLHHVPDENVDDQNHRDRLLRMVKHLSPKVVTLVEQECNTSNVPFYPRFIETLNHYLPVFESIDAVLPREHKERINVEQHCLAREVVNLIACEGAERVERHELLKMWKSRFTMAGLTPIPLSSFVNSTIKSLLKSYSENYTLEESDGILYLGWMNQVLIASCAWR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02656 542 MobiDBLite consensus disorder prediction 22 48 - -
Bva12g02656 542 MobiDBLite consensus disorder prediction 62 88 - -
Bva12g02656 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 33 541 - -
Bva12g02656 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 541 IPR005202 -
Bva12g02656 542 MobiDBLite consensus disorder prediction 62 87 - -
Bva12g02656 542 Pfam GRAS domain family 173 542 IPR005202 -
Bva12g02656 542 Coils Coil 117 137 - -
Bva12g02656 542 ProSiteProfiles GRAS family profile. 163 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02656 Bva-Chr12 19540745 19544477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02656 1 542 GRAS Transcription Factor Family AT1G50600 57.169 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g02656 GRAS 1.2e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02656 - - gmx:100785400 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01106 12 10871898 10873535 Bva12g02656 12 19540745 19544477 BWGD
Bva12g02656 12 19540745 19544477 Bva12g02656 12 19540745 19544477 ECH