Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02652 aTGGCAGCTTTTTCCACTCTTTACCCTTACAATCCTCTTCGTTATTCTCctcctccttcttcttttcccaAGTTTTGGGAGTCCTATGTGAGCTGCAAATTCAATGGAGGATCACTTGGGAAGCCAGTAACAAGTGGCCGCAGGTTCGTGGTGTTTGCCGCGCATTCCAATCCTAAGATTATCAAGACCAACAAGAAGTCGAGGTTCGGACAGCCTCTGTCACCGTACGACACCGACGAAGAAACAGATGACGATGACGTTTTGCATGATGATTGGCTCCCCGATGATGAATTTGCAGAGGTTTCTGACTTTGATGTCAAtggaaagaaatataaatcacATACAATTGAAGGAAAACATAGGCTGCAGGAAAGGGACAGGGGTGCGAGATCTTTTGATTCTGGACAAAGCACTAAAATAAGCAAAAGTGAGAAAGCATCTTCCTTACAATTGAATCGTGATGTAAAGCTTGCAAGAAATTCAAAGGAGAATAAATATCCTCGGTTGTCAGAAGAGATAAATTTGGATGGGAAATGGCTCCCACTTCTTGATTACTTAAGCACATTTGGTCTTATGGAATCTCACTTTATCCAAATGTATGAGAGGCATTTGCCATCACTTCAAATTAACGTATGTTCTGCACAGGAAAGGTTAGAATACTTATTGAGTGTTGGCGTCAAGCATAAAGATGTAAGGAGAATCATTTTAAGGCAGCCTCAAATTCTGGAGTATACAGTAGAGAACAATTTGAAGTGTCATGTTGCTTTCTTAATGGGCTTGGGAATATCAAATTCCCGAATAGGGCAAATCATTGCCGCTGCTCCATCCCTGTTTTCATATAGTGTTGAAAATTCCTTAAAACCAACAGTAAGATACCTTGTAGAGGAAGTTGGCatcaaggaaagagatttgggtAAAGTTATTCAGCTGAGCCCTCAAATTCTTGTTCAGCGTATAGATATTTCATGGAACACTCGATACATGTTTCTTACCAAGGAGTTGGGAGCACCCAGAGATAGCATAGTAAAGATGGTGACTAAGCATCCACAACTTCTCCATTACAGCATAGATGACGGAATTTTGCCAAGGATAAATTTCCTAAGGAGCATAGGAATGCGAAATTCAGAAATCGTGAAAGTCTTGACTAGCCTTACTCAGGTGTTATCTCTGTCACTGGAGGAGAACTTAAAGCCTAAGTACTTGTACTTGGTAAATGAACTTAACAATGAGGTGAAATCCTTGATCAAATATCCAATGTACCTTAGCTTATCTTTAGATCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCTCTAAAGAAAGCCCCAAAAGGACCATTTCCACTAGGATCACTTGTTCCTACTGATGAGTGCTTCTGTCAGCGGTGGGCTGGGACTAGTTTGGATAAATATTTGGCATTTCGACAGAACTTATTACTCAAGAAGTTTGCAGAGAAATATGAAAGGAGAATATA 1475 0.3885 MAAFSTLYPYNPLRYSPPPSSFPKFWESYVSCKFNGGSLGKPVTSGRRFVVFAAHSNPKIIKTNKKSRFGQPLSPYDTDEETDDDDVLHDDWLPDDEFAEVSDFDVNGKKYKSHTIEGKHRLQERDRGARSFDSGQSTKISKSEKASSLQLNRDVKLARNSKENKYPRLSEEINLDGKWLPLLDYLSTFGLMESHFIQMYERHLPSLQINVCSAQERLEYLLSVGVKHKDVRRIILRQPQILEYTVENNLKCHVAFLMGLGISNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKERDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGILPRINFLRSIGMRNSEIVKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVKSLIKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQRWAGTSLDKYLAFRQNLLLKKFAEKYERRI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02652 491 MobiDBLite consensus disorder prediction 133 147 - -
Bva12g02652 491 Gene3D Transcription termination factor 3, mitochondrial 241 478 IPR038538 -
Bva12g02652 491 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 40 483 - -
Bva12g02652 491 PANTHER CGI-12 PROTEIN-RELATED 40 483 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 Pfam mTERF 218 299 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 Pfam mTERF 247 438 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 Pfam mTERF 183 258 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 MobiDBLite consensus disorder prediction 64 87 - -
Bva12g02652 491 MobiDBLite consensus disorder prediction 115 132 - -
Bva12g02652 491 MobiDBLite consensus disorder prediction 115 147 - -
Bva12g02652 491 SMART mt_12 305 337 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 SMART mt_12 378 410 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 SMART mt_12 268 300 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 SMART mt_12 342 373 IPR003690 GO:0003690|GO:0006355
Bva12g02652 491 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02652 Bva-Chr12 19531926 19535511 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g02652 mTERF 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02652 K15032 - gmx:100809638 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02652 12 19531926 19535511 Bva12g02652 12 19531926 19535511 ECH