Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02646 ATGGCTCCAAGagaaaatgcaagaaaagTATTCCAGTATGCTGGGTTTTTGTACTGCAAACAGACCTTACTCTGTTGCTTAGCTGTTTGTACGTTTGATCTTGTTTTGTCTCTATTGTACTACTTTTACTGGTATGAAACTGTTTGGCCTCAAGAGCTTGTGACAATTTCTGATTTAGCACTTAGAACAGTTGCTTGGGGTGCCGTTTGTGTTTATTTGCATTCTGGGTTCTCCAGTTCTGATGAAAGGAATTTTCCCTTTCACTTGAGAATTTGGTGGGCTGTTTACTCTTCTGTTTGCTGTTTTTGCCTTGTCATAGACTTCGTAGTCTATGAAAAGAAAGCTATCTTCCCAATCATATATCTCATTTCTGATATCTGTTCCTCTTTTATGGGTTTGTTTCTCTGTTACGTGTGGTTTTCTGTAAACAAATATGCCAAACTAGCTTCTCTAGAGGAAACTCTTTTGAATGGTAACTCCACTGTAAGCAACAGTTATGATTCAAACAAGACTAAAGGGTATGAAAATGCTGGATTACTCGGTGTTCTTACTTTCTCATGGTTGACTCCTCTTATTGCTCTTGGCAATAAGAAGATTTTGAACCATGAGGACCTCCCTAAGCTATCAAGTAATGACAGTGTCTATGGCTCCTTTCCAAATTTTAGAGAGAATATTGAGTCCAAGTATGGAGGAACTAACAGGGTGACCACTCTTCATTTGGCAAAGACATTAATCTTCTCAGTATGGAAAGGGTTTCTTTTATCAGGCTTCTTTGCATTCTTGAACACATGTGCTTCTTATGCTGGCCCCTATCTGATTGAAACCTTTGTGCAATATCTCAACGGGCGACGCGATTTCGAAAATGAGGGCTATATTTTGGCATTGGCATTTCTTGTTGCAAAGCTTGTGGAGGGCTTTGCGCAGAGGCATTGGGTGTTCAGGTTCCAGCAAGTTGGGGTAAGGGTACAGGCAATGCTGGTAGCTATGATCTATACTAAAGGCTTGAACCTTTCAAGTCAGGCGAAAGAGGGACGCACCAGTGGGGAAATTATCAACTTGATGACTGTTGATGCAGCAAGAGTAGGTGAGTTTTGTTGGTACATGCATGATCCATGGATAACTCTTCTGCAAATTATCTTggcattgttaattttatacaaaagtGTTGGACTTGCTTCAATTGCTGCTTTAGTTGCCACTGTTATTCTGATGCTGGCAAACTCGCCTTTGGTGTCATTTCAAAAGAAGTTTCAAGGCAAGTTAATGGAGACAAAAGACAGAAGAATGAAAGCAACGTCTGAGATTTTAAAGAATATGAGGATTCTAAAGCTACAAGCTTGGGAGATGAAGTTCTTATCGAAGATCATCGAGGTTAGGAACCTTGAGACAATTTGGCTGAAGAAATATCTGATTTGGAATGGAATCGCCagatttctcttctcttctgccCCAACTTTTGTTGCTGTTGTTACTTTTGGTGCTTGTATTCTTCTAGGGATCCCACTTGAATCAGGGAAGATCTTATCTACACTTGCAACTATCCAAATTCTTCAGCAGCCAATGTATTCTCTTCCTGATGCAATTGCAGTAATAGCACAAACTAAAGTTTCCCTTGAGAGGATTGCATCATTCCTTTGTCTTGATGATTTGCAGCCTGACATCATAGAGAAGCTTCCAAGGGGTGCTTCTAATATAGCAATCGAAATAGTTGATGGAAATTTCTCTTGGGATTTTTCTTCAACTACTCACACATTGCAGAATATAAATGTGAAAGTTGGCCATGGCATGAAGGTTGCAGTTTGTGGCACTGTTGGTTCTGGAAAATCAAGTCTTCTTTCTTGCATCCTAGGAGAGGTTCCGAAGCTATCCGGCACCGTGAAGTTGTGTGGAACAAAGGCATATGTTGCTCAATCCCCATGGATACAAAGTGGCAAGATAGAAGAGAGCATATTATTTGGCAAAGAAATGGACAGGGAAAAGTATGAGAGGGTACTGGAAGCATGTGCCTTGACCAAAGACTTAGAAGTTCTACCATTTGGTGATCAGACCATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCACTTTACCAAGATGCtgatatatatctatttgATGATCCTTTCAGTGCTGTGGATGCTCATACTGGATCGCACCTCTTTAAGGAGTGTTTGCTTGGtcttttgaattcaaaaacaGTGATATATGTGACTCATCAAGTGGAGTTCTTACCTGCAGCTGATCTAATATTGGTTATGAAAGATGGAAAGATTACTCAATCAGGGAAGTACAATGATATCCTCAACTCTGGCACAGATTTTGTAGAACTTGTAGGTGCACACAGAGAATCTTTATCTGCACTTAAGTCCTTAGAGAGAAAGCCCACTTCTAAAAATTTGAGTGTCACAGTGGAAGACACAGATTTGTTAAGAGAATTTGGACAAGAGcagaaagaggaaaacaaaGATGTTGAGAATGGTAAAGCCGATGATACAAATGGGCCAAAAGGTCAGCTTGttcaagaggaagaaagagagcAAGGTAAAGTTGGGTTTGGGGTCTACTGGAAATACATCAGAACAGCATATGGAGGAGCTTTGTGCCATTCATATTATTTGCCCAAGTTCTTAACCAGGCTCTTCAAATTGGGAGCAATTATTGGATGGCATGGGCAACTCCTGTGTCTGCAAATACGGAACCTACTGTTGGAAGCTTG 2747 0.3888 MAPRENARKVFQYAGFLYCKQTLLCCLAVCTFDLVLSLLYYFYWYETVWPQELVTISDLALRTVAWGAVCVYLHSGFSSSDERNFPFHLRIWWAVYSSVCCFCLVIDFVVYEKKAIFPIIYLISDICSSFMGLFLCYVWFSVNKYAKLASLEETLLNGNSTVSNSYDSNKTKGYENAGLLGVLTFSWLTPLIALGNKKILNHEDLPKLSSNDSVYGSFPNFRENIESKYGGTNRVTTLHLAKTLIFSVWKGFLLSGFFAFLNTCASYAGPYLIETFVQYLNGRRDFENEGYILALAFLVAKLVEGFAQRHWVFRFQQVGVRVQAMLVAMIYTKGLNLSSQAKEGRTSGEIINLMTVDAARVGEFCWYMHDPWITLLQIILALLILYKSVGLASIAALVATVILMLANSPLVSFQKKFQGKLMETKDRRMKATSEILKNMRILKLQAWEMKFLSKIIEVRNLETIWLKKYLIWNGIARFLFSSAPTFVAVVTFGACILLGIPLESGKILSTLATIQILQQPMYSLPDAIAVIAQTKVSLERIASFLCLDDLQPDIIEKLPRGASNIAIEIVDGNFSWDFSSTTHTLQNINVKVGHGMKVAVCGTVGSGKSSLLSCILGEVPKLSGTVKLCGTKAYVAQSPWIQSGKIEESILFGKEMDREKYERVLEACALTKDLEVLPFGDQTIIGERGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLNSKTVIYVTHQVEFLPAADLILVMKDGKITQSGKYNDILNSGTDFVELVGAHRESLSALKSLERKPTSKNLSVTVEDTDLLREFGQEQKEENKDVENGKADDTNGPKGQLVQEEEREQGKVGFGVYWKYIRTAYGGALCHSYYLPKFLTRLFKLGAIIGWHGQLLCLQIRNLLLEA 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02646 915 SMART AAA_5 594 767 IPR003593 -
Bva12g02646 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 565 789 IPR027417 -
Bva12g02646 915 SUPERFAMILY ABC transporter transmembrane region 244 552 IPR036640 GO:0005524|GO:0016021
Bva12g02646 915 Gene3D ABC transporter type 1, transmembrane domain 226 549 IPR036640 GO:0005524|GO:0016021
Bva12g02646 915 Pfam ABC transporter transmembrane region 253 521 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02646 915 CDD ABCC_MRP_domain1 567 767 - -
Bva12g02646 915 Pfam ABC transporter 585 719 IPR003439 GO:0005524
Bva12g02646 915 MobiDBLite consensus disorder prediction 826 854 - -
Bva12g02646 915 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 149 892 - -
Bva12g02646 915 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 567 790 IPR003439 GO:0005524
Bva12g02646 915 MobiDBLite consensus disorder prediction 826 840 - -
Bva12g02646 915 ProSitePatterns ABC transporters family signature. 692 706 IPR017871 GO:0005524
Bva12g02646 915 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 253 533 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02646 915 CDD ABC_6TM_ABCC_D1 254 541 IPR044746 GO:0140359
Bva12g02646 915 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 149 892 - -
Bva12g02646 915 Gene3D - 555 813 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02646 Bva-Chr12 19509146 19512579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02646 567 813 Calmodulin-binding Proteins AT2G36910 28.839 1.48e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02646 - K05666 gmx:106794105 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02646 12 19509146 19512579 Bva12g02646 12 19509146 19512579 ECH