Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02645 ATGTCGTTTGCTTTCGCAGACTACCTAATGCACCCTGAAACAGGGTTTCTCCTAAAACCTGTTTTCTTACATGGTTTATCTGGTTCTCTCCACCTAGTTTTGTTCCTGGCATTTTTGGTGTCATGGGCCTGCAGCAAAATCAGAGTGAGTCCTCGACATGGGTCAAAAGAGAAATCCCAGAATACTCTGTATAAGAAAGCCCTGTTCTGTTCTGTGGGGTTTTCTGCGTTTAATTTTATCCTATGTCTGTTTAATTACTTCTATTGGTATAGAAGTGGTTGGTCAGATGAAAAGCTCGTGGTCCTTTTGGATTTAGCTGCTAAAACAGTTGCTTGGGCAGTTGTTTGCGTTTACTTGCACACGGGGTTCTTCAGTTCAAGTGAAAAAAGATTTCCATTGTTGTTCAATGTTTGGTGCTTGTTCTACCTCTTTAGCTCCTGTTATTGCTTTGTGGTGGACATTATTCTCTATGAGAAGCACGTTTCTTTGCCGATTCGGTACTTAATTTCAGATGTGTTGTCTGCTTCAGTGGGTTTATTGTTCGCTTACGTGGGGTTTTTCGTGAAAATTGAGGGTGAAGATAGCAGTTTTGAAGAACCTCTTTTGAATGGTAATACGAATGCTACTAATGCTTCAGAGTCAAACAAGAGTAAGGGAGATGAAACTGTTACCCCTTACTCTACTGCTGGAATTTTCAGCATGCTTACGTTCTCTTGGGTTGGTCCTCTTATTGCTGTTGgcaaaaagaagatattagaCCTTGAAGATGTTCCACTACTTGCTAGCGGTGACAGTGTACTTGAAGTTTTCCCGAGTTTCAAAAGTACTATTGAGGCAGATTGTTCTGCAATTAGCAGAGTGACCACATTTAAGCTGATCAAGGCAATGATATTGTCAGCGTGGAAAGAGATTGCATTGACAGCTACTTTTGCATTTGTAAGCACTTTGGCTTCTTACGTTGGTCCATATCTTATTGACACTTTTGTTCAATACCTCAATGGACGAAGGGAATTTGAGAACGAGGGCTATTTCTTGGTGTCTGCATTTTTCATAGCTAAGCTTATAGAGTGCCTGTCACAGAGGCACTGGTTCTTCAGGCTGCAGCAAGCTGGAATTAGGATCCGCGCACTGCTGGTGGCAATAATCTATAGTAAAGGCCTGAGCCTTTCTTGTCAATCGAAACAGAGCCACAGTAGTGGCgaaataatcaatttcatgACTGTTGATGCTGAAAGAGTTGGTGACTTCAGTTGGTACATGCATGATTTGTGGATGGTAGTTCTGCAAGTTTCATTggccttatttattttgtacagAAATCTTGGGCTGGCTTCAATTGCTGCTTTAGTTTCAACTGTTGTTGTAATGCTAGCAAATGTTCCCTTGGGGAAATTGCAAGAGAATTTTCAAGAGAAACTGATGGAGTCAAAAGATAACAGAATGAAGGCTACATCTGAGATTTTAAGAAACATGAGGATCCTCAAACTACAAGGGTGGGAAATGAAGTTTCTGTCTAGGATTATTGATCTGAGGAAGATTGAGCAAGGCTGGTTGAGAAGATTTGTATATACTCAAGCCATCACCTCATTTGTTTTCTGGGGTTCCCCTGCCCTTGTGTCTGTGGTAACTTTTGGTACTTGTATTCTCTTGGGGATCCCTCTTGAATCAGGGAAGATCTTATCTGCACTTGCAACCTTCCGAATTCTTCAAGAGCCCATTTATAATCTTCCAGACACAATTTCAATGATAGCACAAACTAAGGTTTCTCTTGATAGGATTTCATCGTTCCTTCGCCTTGATGAATTGCGATCTGATGTCATAGAGAGGCTTCCAAGGGGCAGTTCTGATATGGCAATCGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCTTCCTCTAATACcacattgaaaaatataaatctcaaAGTTTTTCAAGGCATGAGGGTTGCTGTTTGTGGTACTGTTGGCTCTGGCAAGTCTAGTTTACTTTCTTGTATATTGGGAGAAGTACCGAAGATATCAGGCGTTTTGAAGGTGTGTGGAACAAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGTGgcaaaatagaagagaatatATTGTTTAATGAGGAGATGGATAGAGAAAGGTATGAGAAGGTCCTTGAAGTGTGTTCCTTAAAGAAGGACCTCGAGATTCTATCTTTTGGTGATCAGACTGTTATTGGAGAAAGGGGAATTAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCGCGTGCTGTTTACCAAGATGCTGACATATATCTGTTTGATGATCCTTTTAGCGCTTTGGATGCTCATACAGGTTCCCACCTATTTAAGGAATGTTTGCTGGGTCTTCTAAGTTCAAAGACAGTGATTTATGTCACTCATCAAGTAGAATTTTTACCAGCTGCAGACCTTATCTTGGTCATGAAAGATGGGAGGATTACTCAATGTGGAAAATATAACGACTTGCTCAGCTCAGGGACTGATTTTATGGAACTTGTTGGTGCTCATAGAGAAGCTCTGTCCGCACTTGATTCATCGGATGGAGAGGCAGTATCTGATAAATCAAGTTCCTCGAAACAATGTGCTCCTGGTCATGAAGATAGAGAGCCAAACAAAGATGCGCAGAGTGGTAATACGGATGATATAGATGGGCCAAAAGGCCAGCTTgttcaagaagaagaaagagagaaaggtaGTGTTGGGCTTTCAGTCTATTGGAAATATATCACTACAGCATATGGAGGAGCTCTTGTACCGTTTATATTGTTTGCTATGATTCTGTATCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCTGTCTCAGCAGATGTGAAGCCACCTGTTGGCCCCTATAAGCTCATAGTTGTCTATGTTGCTTTGTCCATGGGAAGCTCTTTCTGTGTCCTTGCCAGATCAACGCTTCTAGTCACAGCTGGTTATAAGACAGCTACCATACTCTTCAATAAAATGCATCACTGCATATTCCGTGCGCCCATGTCTTTTTTTGATGCCACTCCAAGTGGAAGAATCCTTAATAGAGCTTCTACAGATCAAAGCGCTGTGGATTTGACCATTCCTTATCAAGTTAACTCATTTGCCTTCTGTTTGATTCAGCTCTTGGGAGTTATAGCGGTGATGTCTCAAGTTGCATGGCAGGTTTTTATTGTCTTCATACCTGTCATATCTATCTGCATCTGGTATCAGCAATATTATTTACCATCAGCCCGAGAACTATCACGGTTAGTCGGAGTATGCAAAGCTCCAGTTATTCAACACTTTGCTGAAACAATTTCTGGAGCAACAACCATTAGGAGCTTTGATCAGGAGTCAAGATTCCAAAACACAAATATGAAACTGATGGATGGGTATTCTCGGCCCAAGTTCAATATTGCCGGTGCCATGGAATGGTTGTGCTTCCGCTTGGATATGTTGTCTGCTATCACATTTGTCTTCTCTTTGATATTCTTGATATCTATTCCACAGGGAATAATAGATCCAGGTATTGCTGGTTTAGCTGTTACGTATGGACTTAATCTGAACATGTTGCAAGCTTGGTTCATATGGAATCTCTGCAACATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTACACTAGCATCCCAAGTGAGCCACCGCCGGTAATAGAAGAACACCGCCCAGATGCTTTTTGGCCATCACGTGGAGATGTTGATATTCATAATTTGCAGGTGCGGTATGCTCCACATCTACCACTTGTGTTGCGTGGTATTACATGCAAATTTCCTGGAGGATTGAAGACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCATACAAACACTTTTCCGCATTGTCGACCCTACAGCTGGGCAAATCGTGATAGATAGCATTGACATCTCGTCAATTGGACTCCATGATTTGAGGTCTAGACTGAGCATTATCCCTCAGGATCCAACCATGTTTGAAGGGACTGTGAGAAGTAATCTGGACCCCTTGGAGGAATACACAGATGAAGAAATTTGGGAAGCTTTGGATAAGTGTCAACTTGGAGACGAAGTtaggaagaaagaaggaaggcTAGACTCTGCAGTTAGTGAGAATGGGGAGAATTGGAGCATGGGGCAGAGGCAGTTGGTGTGCCTAGGAAGGGTGCTACTTAAGAAAAGTAAGGTCTTGGTGCTTGATGAAGCTACTGCATCCGTCGACACGGCCACTGATAATTTGATTCAGCAAACTCTGAGGCAACACTTCTCTGACTGTACAGTCATTACCATTGCTCATAGAATAACTTCTGTTCTTGACAGTGACATGGTTCTGCTTCTGAGTCAAGGACTTGTAGAGGAATATGACTCTCCAACAAAATTGCTGGAGGACAAGTCATCATCTTTTGCTCAACTCGTTGCAGAGTATACCATCAGGTCCAATGAGTTTTG 4463 0.4065 MSFAFADYLMHPETGFLLKPVFLHGLSGSLHLVLFLAFLVSWACSKIRVSPRHGSKEKSQNTLYKKALFCSVGFSAFNFILCLFNYFYWYRSGWSDEKLVVLLDLAAKTVAWAVVCVYLHTGFFSSSEKRFPLLFNVWCLFYLFSSCYCFVVDIILYEKHVSLPIRYLISDVLSASVGLLFAYVGFFVKIEGEDSSFEEPLLNGNTNATNASESNKSKGDETVTPYSTAGIFSMLTFSWVGPLIAVGKKKILDLEDVPLLASGDSVLEVFPSFKSTIEADCSAISRVTTFKLIKAMILSAWKEIALTATFAFVSTLASYVGPYLIDTFVQYLNGRREFENEGYFLVSAFFIAKLIECLSQRHWFFRLQQAGIRIRALLVAIIYSKGLSLSCQSKQSHSSGEIINFMTVDAERVGDFSWYMHDLWMVVLQVSLALFILYRNLGLASIAALVSTVVVMLANVPLGKLQENFQEKLMESKDNRMKATSEILRNMRILKLQGWEMKFLSRIIDLRKIEQGWLRRFVYTQAITSFVFWGSPALVSVVTFGTCILLGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRISSFLRLDELRSDVIERLPRGSSDMAIEVVDGNFSWDLSSSNTTLKNINLKVFQGMRVAVCGTVGSGKSSLLSCILGEVPKISGVLKVCGTKAYVAQSPWIQSGKIEENILFNEEMDRERYEKVLEVCSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAVYQDADIYLFDDPFSALDAHTGSHLFKECLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGRITQCGKYNDLLSSGTDFMELVGAHREALSALDSSDGEAVSDKSSSSKQCAPGHEDREPNKDAQSGNTDDIDGPKGQLVQEEEREKGSVGLSVYWKYITTAYGGALVPFILFAMILYQLLQIGSNYWMAWATPVSADVKPPVGPYKLIVVYVALSMGSSFCVLARSTLLVTAGYKTATILFNKMHHCIFRAPMSFFDATPSGRILNRASTDQSAVDLTIPYQVNSFAFCLIQLLGVIAVMSQVAWQVFIVFIPVISICIWYQQYYLPSARELSRLVGVCKAPVIQHFAETISGATTIRSFDQESRFQNTNMKLMDGYSRPKFNIAGAMEWLCFRLDMLSAITFVFSLIFLISIPQGIIDPGIAGLAVTYGLNLNMLQAWFIWNLCNMENKIISVERILQYTSIPSEPPPVIEEHRPDAFWPSRGDVDIHNLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLIQTLFRIVDPTAGQIVIDSIDISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEEIWEALDKCQLGDEVRKKEGRLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLSQGLVEEYDSPTKLLEDKSSSFAQLVAEYTIRSNEF 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02645 1487 CDD ABC_6TM_ABCC_D2 925 1219 IPR044726 GO:0140359
Bva12g02645 1487 MobiDBLite consensus disorder prediction 851 901 - -
Bva12g02645 1487 MobiDBLite consensus disorder prediction 202 221 - -
Bva12g02645 1487 Pfam ABC transporter transmembrane region 927 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02645 1487 Pfam ABC transporter transmembrane region 308 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02645 1487 Pfam ABC transporter 637 771 IPR003439 GO:0005524
Bva12g02645 1487 MobiDBLite consensus disorder prediction 867 883 - -
Bva12g02645 1487 Pfam ABC transporter 1261 1409 IPR003439 GO:0005524
Bva12g02645 1487 SUPERFAMILY ABC transporter transmembrane region 296 598 IPR036640 GO:0005524|GO:0016021
Bva12g02645 1487 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 585 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02645 1487 CDD ABC_6TM_ABCC_D1 306 593 IPR044746 GO:0140359
Bva12g02645 1487 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02645 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 841 IPR027417 -
Bva12g02645 1487 Gene3D - 1228 1480 IPR027417 -
Bva12g02645 1487 SMART AAA_5 1270 1462 IPR003593 -
Bva12g02645 1487 SMART AAA_5 646 819 IPR003593 -
Bva12g02645 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1236 1474 IPR027417 -
Bva12g02645 1487 CDD ABCC_MRP_domain1 619 819 - -
Bva12g02645 1487 SUPERFAMILY ABC transporter transmembrane region 925 1226 IPR036640 GO:0005524|GO:0016021
Bva12g02645 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1478 IPR003439 GO:0005524
Bva12g02645 1487 CDD ABCC_MRP_domain2 1242 1462 - -
Bva12g02645 1487 Gene3D ABC transporter type 1, transmembrane domain 890 1225 IPR036640 GO:0005524|GO:0016021
Bva12g02645 1487 Gene3D ABC transporter type 1, transmembrane domain 282 601 IPR036640 GO:0005524|GO:0016021
Bva12g02645 1487 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524
Bva12g02645 1487 Gene3D - 602 863 IPR027417 -
Bva12g02645 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 842 IPR003439 GO:0005524
Bva12g02645 1487 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 87 1485 - -
Bva12g02645 1487 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 87 1485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02645 Bva-Chr12 19500544 19506746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02645 619 865 Calmodulin-binding Proteins AT2G36910 30.337 9.37e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02645 - K05666 gmx:100777836 2301.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02645 12 19500544 19506746 Bva12g02645 12 19500544 19506746 ECH