Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02644 ATGGATAGAGAAAGGTATGAGAAGATTCTTGAAGTGTGTTCCTTAAAGAAGGACCTCGAGATTCTATCATTTGGTGATCAGACAATTATTGGAGAAAGAGGAATCAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTGTTTACCAAGATGCTGACATATATCTGTTTGATGATCCTTTTAGTGCTTTGGATGCTCATACTGGTTCCCACCTATTTAAGCAATGTTTGCTGGGTCTTTTAAGTTCAAAAACAGTGATTTATGTCACTCATCAAGTAGAATTTTTACCAGCCGCAGACCTTATCTTGGTGATGAAAGATGGGAAGATTACCCAATGTGGAAAGTATAATAACTTGCTAAATTCAGGGACTGATTTTATGGAACTTGTTGGTGCACATAGAGAAGCTTTGTCTGCACTTGATTTATCGGATGGAGAGGCAGTATCTGACAAATCAAGTGCCTCAAAACAAGGTGCTAATGGTCTTGAAGGAAGAGAGGCAAAGAAAGATGCGCAGAGTGGTAAATCAGATGATATAGTTGGGCCGAAGGGCCAGCTTgttcaagaagaagaaagagagaaaggtaAAGTTGGGTTTTCTGTCTATTGGAAATACATCACCACAGCATATGGAGGAGCTCTTGTACCGTTTATATTATTGGCTATGCTTCTGTATCAACTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAGCTCCTGTCTCATCAGATGTGAAGCCACCTGTTTGTCCCTATAAGCTTATAGTTGTCTATGTTTCTTTGGCCATGGGAAGCTCTTTCTGTGTCCTTGCCCGTGCAATGCTTCTAGTCACAGCTGGTTATAAAACAGCTACCATACTCTTCAATAAAATGCATCACTGCATATTCCGTGCGCCCATGTCCTTTTTTGATGCCACTCCAAGTGGAAGAATCCTTAATAGAGCTTCCATAGACCAAAGCACTGTGGATTTGACCATTCCTCATCGAGTtaactcattttctttctttctgatcCAGCTCTTGGGAGTTATAGCAGTGATGTCTCAAGTTGCATGGCAGCAATATTATTTACCATCAGCCAGAGAACTATCACGCTTAGTTGGAGTATGCAAAGCTCCAGTCATTCAACACTTCGCTGAAACAGTTTCTGGAACAACAATCATTAGGAGCTTTGACCAAGAATCAAGATTCCAGAACACATACATGAAACTGATAGATGGGTATTCTCGCCCCAAGTTCCATATTGCCGCTGCCACGGCATGGTTGTTTTTCCGCTTGGATTTATTGTGTGCCATCACATTTGCTTTCTCTTTGATATTCTTGATGTCTATGCCAAAGGGACTAATAGATCCAGGTATTGCTGGTTTAATTGTTGCATATGGACTTAACCTGAACATATTGCAAATTCGGATGATATGGAATCTCTGCAACATGGAGAACAAAATTATATCAGTAGAAAGAATGCTTCAGTACACGAAAATCCCGAGTGAGCCTCCTCTAGTAATAGAAGAACGCCGCCCTGATGCTTTTTGGCCATCACGTGGAGAAGTTGATATTCATAATTTGCAGGTGCGTTACGCTCCACACCTGCCACTTGTGTTGCGCGGCATCACATGCAAATTTCCTGGAGGATTGAAGACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCTTACAAACACTTTTCCGAATTGTTGACCCTGCTGCTGGGAGAATTATGATTGATGAAATTGACATCTCTTCCATTGGACTCCATGATTTGAGGTCTAGACTGAGCATTATCCCTCAGGATCCAACCATGTTTGAAGGAACGGTGAGAAGTAATCTGGACCCATTGGAAGAGTACACGGATGAACAAATTTGGGAAGCTTTGGATAAGTGTCAACTTGGAGACGAAATtaggaagaaagaaggaatGCTAGACTCTGCAGTTAGTGAGAATGGGGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTGTGCCTTGGAAGAGTGCTACTTAAGAAAAGTAAGGTTTTGGTGCTTGATGAAGCTACTGCATCCGTCGACACTGCCACTGATAATTTGATTCAGCAAACTCTGAGGCAACACTTCTCTGACTGTACAGTCATTACCATTGCTCATAGAATAACTTCTGTTCTTGACAGTGACATGGTTCTGCTTCTGAGTCAAGGACTTGTAGAGGAGTATGACTCTCCAACAAAATTGCTAGAGGACAAGTCGTCATCTTTTGCTCAACTTGTTGCTGAGTATTTACCATG 2276 0.4073 MDRERYEKILEVCSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARAVYQDADIYLFDDPFSALDAHTGSHLFKQCLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYNNLLNSGTDFMELVGAHREALSALDLSDGEAVSDKSSASKQGANGLEGREAKKDAQSGKSDDIVGPKGQLVQEEEREKGKVGFSVYWKYITTAYGGALVPFILLAMLLYQLQIGSNYWMAWAAPVSSDVKPPVCPYKLIVVYVSLAMGSSFCVLARAMLLVTAGYKTATILFNKMHHCIFRAPMSFFDATPSGRILNRASIDQSTVDLTIPHRVNSFSFFLIQLLGVIAVMSQVAWQQYYLPSARELSRLVGVCKAPVIQHFAETVSGTTIIRSFDQESRFQNTYMKLIDGYSRPKFHIAAATAWLFFRLDLLCAITFAFSLIFLMSMPKGLIDPGIAGLIVAYGLNLNILQIRMIWNLCNMENKIISVERMLQYTKIPSEPPLVIEERRPDAFWPSRGEVDIHNLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLLQTLFRIVDPAAGRIMIDEIDISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEIRKKEGMLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLSQGLVEEYDSPTKLLEDKSSSFAQLVAEYLP 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02644 758 MobiDBLite consensus disorder prediction 165 179 - -
Bva12g02644 758 MobiDBLite consensus disorder prediction 151 191 - -
Bva12g02644 758 Pfam ABC transporter 537 685 IPR003439 GO:0005524
Bva12g02644 758 Gene3D ABC transporter type 1, transmembrane domain 184 501 IPR036640 GO:0005524|GO:0016021
Bva12g02644 758 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 756 - -
Bva12g02644 758 CDD ABC_6TM_ABCC_D2 218 495 IPR044726 GO:0140359
Bva12g02644 758 SUPERFAMILY ABC transporter transmembrane region 205 502 IPR036640 GO:0005524|GO:0016021
Bva12g02644 758 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 756 - -
Bva12g02644 758 CDD ABCC_MRP_domain2 518 738 - -
Bva12g02644 758 Pfam ABC transporter transmembrane region 254 447 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02644 758 Gene3D - 503 756 IPR027417 -
Bva12g02644 758 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 230 483 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g02644 758 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 522 754 IPR003439 GO:0005524
Bva12g02644 758 SMART AAA_5 546 738 IPR003593 -
Bva12g02644 758 SMART AAA_5 5 112 IPR003593 -
Bva12g02644 758 Pfam ABC transporter 25 64 IPR003439 GO:0005524
Bva12g02644 758 Gene3D - 1 151 IPR027417 -
Bva12g02644 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 751 IPR027417 -
Bva12g02644 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02644 Bva-Chr12 19494374 19497866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02644 518 753 Calmodulin-binding Proteins AT2G36910 30.000 2.08e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02644 - K05666 gmx:100818714 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02644 12 19494374 19497866 Bva12g02644 12 19494374 19497866 ECH