Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02636 ATGAGGACATCAATTCTGGGACTGTTTGTTTTTACCATTTTGTTTCTGTGGGCTAAGGTAGACTTAGCAGAAGGTGAGATTAGTAATCTAGGTAATTATATCAGTTGGGATGATCTGAGGGTTGATGAGAGTAGGTTGGTGTTCATGAATGGCGATGGATCAGCTAGAGGTGCTACCGAGGAAGGTGGCGTTATTGTTGTAGAGCAGCATGGTAGGGGAGATTCAACAACTGTTCAAGGAGCTGTGGATATGGTTCAAGAGGATAACCAACAAAGAGTTAAAATATACATCATGCCCGGAGTTTATAGCAAAGCATCTGATATAGGCCCTGATGGGAAAGAAATTGGCATGGCTTATACAGCAACCCTACGAGTAGATGCTGATTATTTTTGTGCATCTGGGATCACCGTTGAGAACTCCATCGTTGCCTATCCTGGTGAATATGGAAAGCAAGCAGTGGCTCTTCGCGTAGATGGCGATAGGGCTGTGTTCCACGGAGTTAGAATCTTAGGGTCTCAGGATACTCTCTTGGACAACCTGGGAACTCATTACTTCTACAGAAGCTACATTGAAGGAGCCATTGATTTTATATGTGGCAGAGCTAAATCACTATACGAGGAGTGTGTTATTCGATCAAAGAGTGCTGGATCAATTACTGCACATTACAGGGATTCGCCATATCTGGATACTGGTGAGATGGAGATATCGGTTTTCCGAGTTTCggccttttttgttttggttttcttcatgTGGGTTGAGGTGAATTTAGCAGAGAGTGGCAATGTCCATGTCAATGCCGGAAAATATATCAGTTGGGATGATTTGAAGGTGGATGAGCATAGGTTGAAGTTGAAAAATGACAACGAGGGTAGAGTTATTGTGGTTGATCAGCATGGCAGGGGACATTCAAGAACTGTTCAAGGAGCTGTGGATATGGTTCCCGAtcacaacaaagaaagagtgaaaatttacatttacCCTGGAATTTACAGAGAGAAGGTGTTTGTGCCAAAGAGCAAGCCATATGTCTCGTTTATagggaaaaaagataaaacagcAGGCGTAGTTATTACTTGGAACAGCAAGGCTTCAGATAGAAGCTCAAATGGCCAAGAACTGGGAACCTTTGGTTCAGCAACTGTAGCAGTAGAATCAGATTATTTCTGTGCAACTGAGATTACTTTTCAGAACTCTGTAGTTGCAGTGGTTGGTGGGCGTGGAATGCAGGCAGTGGCATTGAGGGTAGACAGTGACAGAGCTGTGTTCTACAGAGTTGGCATTCTCGGGGCACAGGACACTCTCTTAGATAGCACGGGAACACACTACTTTTACAAATCTTACATCCAAGGAAACGTTGATTTCATATTTGGCAATGCAAAATCACTCTACGAGGACTGTCGTCTGCAATCAACAGCCAAGAGCTATGGAGCAATTGCAGCTCATCACAGGAATTCACCAAATGAAGAGACAGGGTTTTCTTTCCTGGGTTGTGAAATCCGAGGAACCGGTACTAATGTCTTGCTGGGAAGAGCTTGGGGAGATTATGCAAGAATCGTCTACTCGTTCTGTAACATGGAAGACATTATTGCCAGAGAAGGATGGAGCGAATGGCAGCATCCATCTAGAAAGAAGACGGCGGTGTTCGGAGAATTCCAGTGCGGGGGAATAGGAGCAGATAGGAGTGGTAGGGTGCCATGGTCAAAATCTTTTCGATATGAGGAGGCAAGGCCATTCATCGGCAAAGACTTCATTAATGGAGACCAATGGCTTAGACTATA 1778 0.4258 MRTSILGLFVFTILFLWAKVDLAEGEISNLGNYISWDDLRVDESRLVFMNGDGSARGATEEGGVIVVEQHGRGDSTTVQGAVDMVQEDNQQRVKIYIMPGVYSKASDIGPDGKEIGMAYTATLRVDADYFCASGITVENSIVAYPGEYGKQAVALRVDGDRAVFHGVRILGSQDTLLDNLGTHYFYRSYIEGAIDFICGRAKSLYEECVIRSKSAGSITAHYRDSPYLDTGEMEISVFRVSAFFVLVFFMWVEVNLAESGNVHVNAGKYISWDDLKVDEHRLKLKNDNEGRVIVVDQHGRGHSRTVQGAVDMVPDHNKERVKIYIYPGIYREKVFVPKSKPYVSFIGKKDKTAGVVITWNSKASDRSSNGQELGTFGSATVAVESDYFCATEITFQNSVVAVVGGRGMQAVALRVDSDRAVFYRVGILGAQDTLLDSTGTHYFYKSYIQGNVDFIFGNAKSLYEDCRLQSTAKSYGAIAAHHRNSPNEETGFSFLGCEIRGTGTNVLLGRAWGDYARIVYSFCNMEDIIAREGWSEWQHPSRKKTAVFGEFQCGGIGADRSGRVPWSKSFRYEEARPFIGKDFINGDQWLRL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02636 592 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 104 - -
Bva12g02636 592 PANTHER PECTINESTERASE QRT1 256 592 - -
Bva12g02636 592 Gene3D - 291 592 IPR012334 -
Bva12g02636 592 SUPERFAMILY Pectin lyase-like 62 231 IPR011050 -
Bva12g02636 592 Pfam Pectinesterase 293 587 IPR000070 GO:0030599|GO:0042545
Bva12g02636 592 Pfam Pectinesterase 119 231 IPR000070 GO:0030599|GO:0042545
Bva12g02636 592 PANTHER PECTINESTERASE QRT1 104 231 - -
Bva12g02636 592 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 256 592 - -
Bva12g02636 592 SUPERFAMILY Pectin lyase-like 291 590 IPR011050 -
Bva12g02636 592 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 104 231 - -
Bva12g02636 592 PANTHER PECTINESTERASE QRT1 23 104 - -
Bva12g02636 592 Gene3D - 48 233 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02636 Bva-Chr12 19425938 19431543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02636 238 544 Carbohydrate Esterase AT5G55590 54.655 2.55e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02636 K01051 - jre:108994369 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02636 12 19425938 19431543 Bva12g02636 12 19425938 19431543 ECH