Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02635 ATGACTGTACATGATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTATTTCGCAGGAGCGTGGCAATCGTGTGGTCCACTATTACTTGAAGGATTCTGCTGGGGAATCCATCCTTGCAGTTGTAGGTACTGAGAGGAGCGTTAGACATATGTTCTATGTAGTTGCGGATGAGTTTGTGGAAGTTTATGCAAAGGAGGGTTCCATTCATGCTGGTTTCAAATGGAGGTCTAGAAGAGAGGTGGTGGATTGGCTGACATCGCTGCTATCAAAGCAACATCTGCCAGGAGAAAGAATTGTGTCATCAAATGATAATTTAGCACAAGCTCATGAGAACACAGATAGAGATAGTGGAATCAGTGAAATTGGTGCCCTCCATGCTCAACTAGCTAATGACAAGGGTCTTCTaatgagtagcttcaaaggaCTCAATTCGGATATTGTTTGGTCAGGAGTTGCATGGACGTGTGGCAAACAACTTAAACATTATCCATCATTTTGCAGGAATGGGATCAAGATAGTGATTCAGTCCTTTGTTTTTGTCATGGCAAAAGGAGAGGACCATTACATTGCTTATTTGGAGGATATGTATGAAGACAGGAGGGGTcaaaaaaaggttaaagtGAGGTGGTTTCACCATAATCAAGAAGTCAAGGATGTAATTCCTGTACGAAACCCTCATCCTCATCCTCGTGAAGTTTTTATTACACCTTATTCTCAGGTTATTAGTGTGGAGTGTATTGATGGTCCAGCAACAGTCTTAACTCGTGAACATTATGAAAAATACTCGCCTGCTTTTTCCCCTGCTTCATCAgacaaaatacatttttgcTCTAGACAAATCAGAAGCAACAAAGTGAAGTCCTTTGACTTGAGTAAACTGCGGGGCTACTTTGATCAACCAATCCTCTCTTACTTGCATCTTGATTCTTTCCAAAATCCTGAGTCGAAGTCCAATAGTCTTACtgcagaagaagatgaagagttGAGTGCAGGAAATGATGCAAGGGTGGGAGCAAAGAGGACCAGAACTGATAAGGGGTCTCCATGTTCTTGGATAGATCACCAAGGATTTAGGAAGTTAATTAGAAGTAAGAAAATGATGGTGCCCAAAACCTTTGAGAATGTAAATTGTGCTCAGCCAGACAGGAGATTGCTTCCCTTGAAACAGGATGAGTTTCATCCTCTGTATAACCACATATACAAGGTTGATGACAAGGTAGAGTTGCTTTGTCAAGACAGCGGAATCAGAGGCTGCTGGTTCAGGTGTACCATTCTGCTGGTATCACGGAAACAGATGAAAGTTCGATATGATGATGTGCAGGAAGAAGATGGAAGCAGCAATCTTGAGGAATGGATCCGTGTTTTCAAACTGGCAATGCCTGATAAGCTTGGTATGAGACATGCTGGCCGGCCCACCATCAGACCAGCCCCTTCTTTTGAGAAGCAAGGAGAACTGGCAGTTGAAATTGGAACTGCAGTTGATGCATGGTGGAGCGATGGCTGGTGGGAGGGAATCGTTAGTGGAATTGAAAACTGTAGCGATAATGATAACGTGCTGGTTTACTTTCCTGGTGAAGGCTTGCTACAGGAACTGTCCAAGAAGGATCTTAGAATATCTAGAGATTGGTTGGGTGATAGGTGGGTTGATGTTAAGGGGAAGCCCGATATAGTCTCGACCGTAATTGCAGTAAATAGTTCAAATGCCAAGCCTTTCGTGTCCCCCTTTATCGCTAAAGATGTTGACTCTGCTGGTACATTATGTCATGAAGTTCCTGTTATTAATGGCTCTAAAGAGCTAGATACTGTTAATGAGAAACTTGTGTCCCCTGAATGCTGTGCGGAAGATGTAGATTTTATCCATGATAACGGTCCTCCTTCACCAAATGAGAATGGAACTCAGGATGACAACATTGAGATCCATGTTGATTGtactaatgaaaaaaatgatgatgatggtaaTGGTAAGGAAAGCGACGAGGGTGGTGATAACAAAGATGATAATGAGGGTCGGGGTATGGAGGTATCTGAAACTTATGGGCAGGACTGTAAAACTGTAGAGCTCATGCAAGTGACtgtata 2078 0.4105 MTVHDRCFVEWKEQFISQERGNRVVHYYLKDSAGESILAVVGTERSVRHMFYVVADEFVEVYAKEGSIHAGFKWRSRREVVDWLTSLLSKQHLPGERIVSSNDNLAQAHENTDRDSGISEIGALHAQLANDKGLLMSSFKGLNSDIVWSGVAWTCGKQLKHYPSFCRNGIKIVIQSFVFVMAKGEDHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKDVIPVRNPHPHPREVFITPYSQVISVECIDGPATVLTREHYEKYSPAFSPASSDKIHFCSRQIRSNKVKSFDLSKLRGYFDQPILSYLHLDSFQNPESKSNSLTAEEDEELSAGNDARVGAKRTRTDKGSPCSWIDHQGFRKLIRSKKMMVPKTFENVNCAQPDRRLLPLKQDEFHPLYNHIYKVDDKVELLCQDSGIRGCWFRCTILLVSRKQMKVRYDDVQEEDGSSNLEEWIRVFKLAMPDKLGMRHAGRPTIRPAPSFEKQGELAVEIGTAVDAWWSDGWWEGIVSGIENCSDNDNVLVYFPGEGLLQELSKKDLRISRDWLGDRWVDVKGKPDIVSTVIAVNSSNAKPFVSPFIAKDVDSAGTLCHEVPVINGSKELDTVNEKLVSPECCAEDVDFIHDNGPPSPNENGTQDDNIEIHVDCTNEKNDDDGNGKESDEGGDNKDDNEGRGMEVSETYGQDCKTVELMQVTV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02635 692 MobiDBLite consensus disorder prediction 315 342 - -
Bva12g02635 692 MobiDBLite consensus disorder prediction 641 672 - -
Bva12g02635 692 SMART BAH_4 170 292 IPR001025 GO:0003682
Bva12g02635 692 ProSiteProfiles BAH domain profile. 170 291 IPR001025 GO:0003682
Bva12g02635 692 SMART agenet_At_2 485 544 IPR014002 -
Bva12g02635 692 SMART agenet_At_2 398 464 IPR014002 -
Bva12g02635 692 MobiDBLite consensus disorder prediction 641 692 - -
Bva12g02635 692 Pfam Agenet domain 403 477 IPR008395 -
Bva12g02635 692 Gene3D - 140 296 IPR043151 -
Bva12g02635 692 Pfam BAH domain 177 284 IPR001025 GO:0003682
Bva12g02635 692 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 657 - -
Bva12g02635 692 PANTHER OS07G0607300 PROTEIN 4 657 - -
Bva12g02635 692 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02635 Bva-Chr12 19420261 19425614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02635 412 542 PHD Transcription Factor Family AT5G58610 30.597 3.73e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02635 - - gsj:114395106 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02635 12 19420261 19425614 Bva12g02635 12 19420261 19425614 ECH