Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02594 ATGGAAATTGGAAGAGAGGATGAGATTGAGGACATGTCAATGTCAATGTCAATGTCACCCCCATCAATGGGTTCTATGCAGATAGCAGGCAGCAATGGCTTTGGCCACAACATGGAGTTCATGTCTCAAGCCTATCTTAGGAACAGGTACTCAGAGATTGACATTAAGGTTGAGGATTCTGAGACCAACCAAGATCGCCCTCTTCCCATATTTCTCAAGTTTGAAGATGTAGAGTTTAAGGTGAGAAATAACCATGCACCTATCAATAACCCTGTCAAAACAGTGGTGTCAAAGGTAGCAGCACAACTCAATGTGGAACAAGACAGATACAAGAAAATCTTGAAGGCCATCACAGGAAGCATTGGCCCAGGTGAAATTCTTGCGCTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAAGGTCATAGGAGGAAGATTACTTGAGAATATCAAAGGGAAAATAACTTACAATGATGTCAAATTCACTGCTACTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATATTCTTTTCCCACAATTAACATTAGAAGAAACATTGATTTTTTCTGCATTCTTAAGGTTGCCAACCAACATGAGCCGACAACAGAAATATGCAAGAGTGGAGACAACTGTGAAGGAACTAGGCCTTGAAAGATGTCGCCACACAAAGATAGGTGGAGGATTTATCAAAGGCATATCAGGaggagaaaggaagagaacCAGCATAGGTTATGAAATTCTTGTTGATCCTTCACTGCTGCCACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCGGCAAACAAACTCCTCCTAACCCTTCAGGGGCTTGCAAAGACAGGAAGAACAATAATTACGACGATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAGCTTCTTTTGATAGCAGAAGGGTATCCAGTTTACTACGGAAAAGCTACAGAATCGATGGAATACTTTTCATCCATGAGGTTCATCCCAGAAATACCAATGAATCCTGTAGAATTCTTGCTCGATTTGGCGACTGGACAAGTAAATCATATAAGTGTTCCAGAAGATATTTTGGAGGGTCAAGAATCTGCTGACCCTTCAAAAGCTGTTATCAAATATCTACAACTCAAGTACAAAACTCTATTAgaaccaaaagagaaagagaatcaTAGGACAATAAGGGCACCAGAGCATCTGCAATTAGCCATTCAAGTTAAGAGGGAGTGGACATTGAGCTGGTTGGACCAATTCATGATTCTATCTAAGAGAACATTCAGAGCAAGATGCAAGGATTATTTTGATAAGCTAAGACTAGTTCAAGCACTTGGAATTGCACTCTTGTTGGGGCTTCTTTGGTGGAAATCTTCTACCAATACAGAGGCTCAACTAAGAGATCAGGTTGGCTTAATGTTCTATATCTGTATATTATGGACATCTTCATGCATTTTTGGAGCAGTCTATGTGTTTCCGTTTGAAAAGGTATACGTGGTGAAAGCAAGGAAAGCAGACATGTACAGATTAAGTGTATACTATGCATGCAGCACACTGTGTGACATGGGGCACACGTTTTCTATTCTACCTTCTTCATGCTTATCTTCTATTACAAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATTCAAAGAGCAGGAATGGCTGCTTCTTTATTTCTAATGTTTTTCCTTCTTAGTGGTGGCTATTATGTTCAGCACATACCAAAATTCATGCAGTGGTTGAAGTATCTGTCATTCATGTATTATGGGTTGAGGCTTCTGCTGAAAGTGCAATACTCAGGAGACCAATTGTACGAGTGTGGAAGCAAAGGTGGTTGTCGACCTTTGCAGAGTTCACCTTCATTTGACACTGTAAACTTAAAAGGAGGCTTAAAAGAAGTGTGGGTTCTGCTGGCCATGGCTATGTGCTTTCGCTTATTAGCTTACTTTTGCCTTCATAGACGAATTGATGTCTGCAATGTTTG 2000 0.4025 MEIGREDEIEDMSMSMSMSPPSMGSMQIAGSNGFGHNMEFMSQAYLRNRYSEIDIKVEDSETNQDRPLPIFLKFEDVEFKVRNNHAPINNPVKTVVSKVAAQLNVEQDRYKKILKAITGSIGPGEILALMGPSGSGKTTLLKVIGGRLLENIKGKITYNDVKFTATVKRRIGFVTQEDILFPQLTLEETLIFSAFLRLPTNMSRQQKYARVETTVKELGLERCRHTKIGGGFIKGISGGERKRTSIGYEILVDPSLLPLDEPTSGLDSTSANKLLLTLQGLAKTGRTIITTIHQPSSRIFHMFDKLLLIAEGYPVYYGKATESMEYFSSMRFIPEIPMNPVEFLLDLATGQVNHISVPEDILEGQESADPSKAVIKYLQLKYKTLLEPKEKENHRTIRAPEHLQLAIQVKREWTLSWLDQFMILSKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICILWTSSCIFGAVYVFPFEKVYVVKARKADMYRLSVYYACSTLCDMGHTFSILPSSCLSSITSQGAGELFGAAVMSIQRAGMAASLFLMFFLLSGGYYVQHIPKFMQWLKYLSFMYYGLRLLLKVQYSGDQLYECGSKGGCRPLQSSPSFDTVNLKGGLKEVWVLLAMAMCFRLLAYFCLHRRIDVCNV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02594 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 661 - -
Bva12g02594 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 330 IPR027417 -
Bva12g02594 666 SMART AAA_5 123 314 IPR003593 -
Bva12g02594 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 7 661 - -
Bva12g02594 666 Pfam ABC-2 type transporter 420 527 IPR013525 GO:0016020|GO:0140359
Bva12g02594 666 Gene3D - 98 331 IPR027417 -
Bva12g02594 666 CDD ABCG_EPDR 96 318 - -
Bva12g02594 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 336 IPR003439 GO:0005524
Bva12g02594 666 Pfam ABC-2 type transporter 293 354 IPR043926 GO:0140359
Bva12g02594 666 Pfam ABC transporter 114 264 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02594 Bva-Chr12 19238881 19241929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02594 112 297 Calmodulin-binding Proteins AT2G36910 30.366 6.87e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02594 K05681 - gmx:100815259 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02594 12 19238881 19241929 Bva12g02594 12 19238881 19241929 ECH