Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02584 ATGCCTGCAAGCTTAAGGAATCTATCACTTTCTCCCAAAATCTTCTCCTTTACCTTACTTCTTTCAATAAAcactcttctcttttcatgTTGTTACTCCATTAATGAACAAGGCCAAGCTCTTCTGGCATGGAAGAACAGTTTGAACAGCACAGCAGATGCATTGGCATCATGGAATCCTTCAGACCCAAGTCCATGCAGCTGGTATGGTGTGCACTGCAACTTGGGAGGAGATGTGGTGGAGATAAGCTTGAAAGCACTGGATTTGCAGGGCTCATTgccttcaaattttcaagctCTCCAGTCCTTGAAGATTCTTGTAGTCTCATCAACCAACATCACTGGCACAATCCCAAAGGAAATTGGAGACTATCAAGAGCTCATTTTAATTGATCTCAGTGACAATTCTCTTTCAGGTGAAATCCCAGAAGAAATTTGCAGACTTAGCAAACTGCAAAGTCTATCTCTTCACACCAACTTCCTTCAAGGCAATATTCCAGCCAACATTGGAAACTTGTCAAGTCTTGTGAATTTGACACTCTATGACAACCAACTCAGTGGTGAAATTCCAAAGAGTATTGGGGCCTTAAGCAAGCTCCAAACATTCAGAGCAGGtgggaataaaaatcttaaggGTGAGCTGCCATGGGAAATTGGACACTGTACCAACTTGGTTATGTTAGGCCTTGCAGAAACCAGCATCTCTGGGAGTCTTCCTGCATCAATTGGAGAGCTAAAAAGAATCCAAACCATAGCCATTTACACAACTCTATTGTCAGGCTCTATCCCAGAAGAGATTGCCAATTGCAGTGAGCTGCAGAACCTGTACTTGTATCAGAACTCAATCTCAGGTTCAATCCCAAGACAAATTGGAAAGCTCAGCAAGCTTCAGAGTCTCCTTCTATGGCAAAACAGCATCGTGGGCACCATCCCAGATGAGCTGGGAAGCTGCACAGAGCTCAAAGTCATAGACTTATCAGAAAACCTTCTCACCGGAAGCATACCGAGGAGTTTTGGGCAGCTTTCAAATCTTCAAGAGCTTCAACTTAGTGTTAATCAGCTGTCAGGTATTATACCTCCTGAAATCACAAACTGCACTGCCCTGAATCAGCTTGAATTTGACAACAATGCCATTTCTGGTGAGCTTCCTCCCCTTATGGGCAACTTGAAAAGCTTGACTCTGTTCTTTGCCTGGCAGAACAAGTTGACAGGAAAAATCCCAGAAAGCCTCTCTGAGTGCCAGAATCTTGAGGCGCTTGATCTTTCCTACAACAATTTATTTGGTCCAATACCCAAACAACTATTTGGGTTGAGAAATCTCACAAAACTTTTGCTTCTTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGCAACTGCAAAAGCCTCTACAGGTTAAGATTGAACCACAACAGATTGGCAGGTAGCATTCCATCTGAGATTGGAAGcttgaagaatttgaacttTGTGGATTTGAGCAGCAATCATCTTGTGGGAGAGATCCCTTCAACATTATCTGGTTGTTATAACCTTGAGTTCTTGGATCTTCACTCGAATAGTCTCACAGGTTCTGTACCAGAGACTTTGCCGAAAAGCCTCCAGTTATTAGACTTGTCAGACAACAGGCTAACTGGTGTTCTAAGCCATACCATTGGCTCATTAACAGAATTAACCAAACTAAACCTGGGAATGAATCAGCTCAATGGAAGAATCCCTTCAGAGATCCTTTCTTGCTCTAAGCTGCAACTTTTAGACCTGGGAAGCAATGCTTTTTCTGGAGAGATTCCTGGGGAAGTTGGTCGAATCCCTTCACTAGAAATCTCTCTTAATCTTAGCTGCAACCAATTTTCTGGTGAAATCCCATCTCAGTTTTCTGGCCTTACCAGACTAGGAGTGCTTGATCTCTCCCACAACAAGCTTTCTGGGAACTTGAACTCTCTTTCAGACCTTCAGAACCTTGTGTCCTTGAATGTTTCCTTCAATGACTTCTCTGGTGAATTGCCAGACACCCCATTCTTCAGAAAACTCCCTCTCAGTGATCTTGCTGCAAATGAAGGCCTCTACATCGCCGATGGTGTTGTAACTCCAGCAGACAGAATGGGATCCAATGGCCGTGCCAAATCAGCCATGAAATTCATAATGTCCATCCTCTTAAGCACCAGTGCAGTGCTAGTACTGCTCACAATCTATATCTTTGTTCGAGTTCACATGGCAAATAGAGAACTCATAGAAAATGACACTTGGGAAATGACCTTTTATCAGAAACTTGAGTTCTCCATCGATGACATCGTCAGAAACTTGACTTCAGCCAATGTCATTGGCACTGGAAGCTCTGGAGTTGTGTACAAAGTGATGATCCCAAGTGGCGAAACACTAGCAGTGAAGAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAGCTCAGAAATTCAAACACTAGGTTCAATCAGACACAAGAACATCATTAGGCTTCTGGGCTGGGGATCCAATAAGAGCCTCAAGCTGCTGTTTTATGATTATCTCCCTAATGGAAGCTTGAGCTCACTGCTTCATGGTTCAGGAAAAGGAGTAGAATGGGAAGCTAGATTTGATGTTATTTTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTGTGCCTGCAATATTGCATGGAGATGTCAAAGCAATGAATGTGCTATTGGGTCCTGGAAATCAACCTTTCCTTGCTGATTTTGGCCTTGCAAGAATTGCAGATGAGAATAATGATGACCCTAAAAATTCCAAGCCAGTTCAGAGACCTTTCCTTGCTGGTTCCTATGGATACATGGCTCCTgAGCATGCATCATTGCAAAGGATCACTGTGAAGAGTGACATTTACAGTTTTGGTGTGGTTCTTTTTGAGGTCTTGACAGGGAAGCACCCACTGGACCCAACTTTACCAGGTGGTGCACAGTTGGTTCAGTGGGTTAGGAACCATTTGGCTAGCAAAGGAGACCCATCTGAAATTCTTGACCAAAAGCTGAGGGGAAGGTCTGATCCTACCATGCATGAAATGCTTCAAACTCTTGCTGTATCATTTCTCTGTGTCAGCACCAGAGCTGACGAGCGTCCAACAATGAAGGACGTGGTGGCAATGCTCAAGGAAATTAGACCTGACGAGACCTCAAGAGCTGACCCTGAGTTTCTCAAGGGAGGTTTACAAGCACACAGCTCTCCACCAGCACCACCAAAGAATGAAacagtgaagaagaagagagtgaCTTG 3254 0.4256 MPASLRNLSLSPKIFSFTLLLSINTLLFSCCYSINEQGQALLAWKNSLNSTADALASWNPSDPSPCSWYGVHCNLGGDVVEISLKALDLQGSLPSNFQALQSLKILVVSSTNITGTIPKEIGDYQELILIDLSDNSLSGEIPEEICRLSKLQSLSLHTNFLQGNIPANIGNLSSLVNLTLYDNQLSGEIPKSIGALSKLQTFRAGGNKNLKGELPWEIGHCTNLVMLGLAETSISGSLPASIGELKRIQTIAIYTTLLSGSIPEEIANCSELQNLYLYQNSISGSIPRQIGKLSKLQSLLLWQNSIVGTIPDELGSCTELKVIDLSENLLTGSIPRSFGQLSNLQELQLSVNQLSGIIPPEITNCTALNQLEFDNNAISGELPPLMGNLKSLTLFFAWQNKLTGKIPESLSECQNLEALDLSYNNLFGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGNCKSLYRLRLNHNRLAGSIPSEIGSLKNLNFVDLSSNHLVGEIPSTLSGCYNLEFLDLHSNSLTGSVPETLPKSLQLLDLSDNRLTGVLSHTIGSLTELTKLNLGMNQLNGRIPSEILSCSKLQLLDLGSNAFSGEIPGEVGRIPSLEISLNLSCNQFSGEIPSQFSGLTRLGVLDLSHNKLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFRKLPLSDLAANEGLYIADGVVTPADRMGSNGRAKSAMKFIMSILLSTSAVLVLLTIYIFVRVHMANRELIENDTWEMTFYQKLEFSIDDIVRNLTSANVIGTGSSGVVYKVMIPSGETLAVKKMWSSEESGAFSSEIQTLGSIRHKNIIRLLGWGSNKSLKLLFYDYLPNGSLSSLLHGSGKGVEWEARFDVILGVAHALAYLHHDCVPAILHGDVKAMNVLLGPGNQPFLADFGLARIADENNDDPKNSKPVQRPFLAGSYGYMAPEHASLQRITVKSDIYSFGVVLFEVLTGKHPLDPTLPGGAQLVQWVRNHLASKGDPSEILDQKLRGRSDPTMHEMLQTLAVSFLCVSTRADERPTMKDVVAMLKEIRPDETSRADPEFLKGGLQAHSSPPAPPKNETVKKKRVT 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02584 1084 MobiDBLite consensus disorder prediction 1047 1084 - -
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 433 530 IPR032675 -
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 531 609 IPR032675 -
Bva12g02584 1084 Gene3D Transferase(Phosphotransferase) domain 1 842 1059 - -
Bva12g02584 1084 PRINTS Leucine-rich repeat signature 534 547 - -
Bva12g02584 1084 PRINTS Leucine-rich repeat signature 628 641 - -
Bva12g02584 1084 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Bva12g02584 1084 SUPERFAMILY Protein kinase-like (PK-like) 753 1043 IPR011009 -
Bva12g02584 1084 SMART serkin_6 768 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02584 1084 Pfam Protein kinase domain 771 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02584 1084 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1056 - -
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 269 432 IPR032675 -
Bva12g02584 1084 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1056 - -
Bva12g02584 1084 SUPERFAMILY RNI-like 82 379 - -
Bva12g02584 1084 SMART LRR_sd22_2 531 557 - -
Bva12g02584 1084 SMART LRR_sd22_2 148 174 - -
Bva12g02584 1084 SMART LRR_sd22_2 389 412 - -
Bva12g02584 1084 SMART LRR_sd22_2 628 653 - -
Bva12g02584 1084 SMART LRR_sd22_2 317 346 - -
Bva12g02584 1084 SMART LRR_sd22_2 269 295 - -
Bva12g02584 1084 SMART LRR_sd22_2 413 439 - -
Bva12g02584 1084 SMART LRR_typ_2 293 317 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 172 196 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 437 461 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 341 365 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 555 579 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 628 651 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 148 171 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 530 554 IPR003591 -
Bva12g02584 1084 SMART LRR_typ_2 485 509 IPR003591 -
Bva12g02584 1084 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bva12g02584 1084 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 610 692 IPR032675 -
Bva12g02584 1084 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Bva12g02584 1084 Gene3D Ribonuclease Inhibitor 204 268 IPR032675 -
Bva12g02584 1084 SUPERFAMILY L domain-like 609 685 - -
Bva12g02584 1084 ProSiteProfiles Protein kinase domain profile. 768 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02584 1084 SUPERFAMILY RNI-like 286 607 - -
Bva12g02584 1084 Gene3D Phosphorylase Kinase; domain 1 734 841 - -
Bva12g02584 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Bva12g02584 1084 Pfam Leucine rich repeat 609 664 IPR001611 GO:0005515
Bva12g02584 1084 Pfam Leucine rich repeat 533 591 IPR001611 GO:0005515
Bva12g02584 1084 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02584 Bva-Chr12 19193591 19197741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02584 31 1074 Receptor kinase-like Gene Family AT5G56040 68.476 0.0 1432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva12g02584 Pkinase 3.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02584 - - gmx:100802880 1727.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02584 12 19193591 19197741 Bva12g02584 12 19193591 19197741 ECH