Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02581 ATGGGTACTAAATCTGTCGTAGACTTACTAGAATCATCCTCAGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTAGATCAAAGAACGTCAGGGATAGAGCAACCAACAACTTCCGAAGCCGAACACATGTCTAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCAGCATCTGGGAAGACTACAGTTTGTAACATGATCATTCAGCAGCTTCATGACCAACGTGTGGTACTTGTAAATCAGCTAAATTTGAAGTGCTTGAAGCCACATGAGCATGCTTTCGTTTTTCTGAATCTTCTTAGGGAttcattttatcataatttgacCGAGGAGGAACTTGCAAGAGTACAGGATTACAACTTTGACCACCCTGATGCTTTTGATACTGAGCAATTATTATGTGTTATGGACAAGTTGAGACATGGACAAGCCGTAGATATTCCAAACTATGACTTCAAGAGTTACAAGAGCGACATATATCCAGCAAGAAGGGTAAACCCTTCAGATGTCATAATTTTGGAAGGCATACTTGTGTTCCATGACCCACGTGTTCGAGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCGAGGAGGATCAGGCGTGATACTGTTGAGAAGTGTCGGGATATTGGTGCAGTGCTTGATCAGTACTCCAAATTTGTGAAGCCTGCTTTCGATGACTTCATTCTTCCAACTAAGAAGTATGCTGATATCATCATACCTCGTGGAGGCGATAATCATGTAGCCATTGATTTGATTGTACAGCATATCCGCACTAAACTTGGTCAGCATGACCTATGTAAAATATATCCAAATTTATATGTCATTCAATCAACTTTTCAGATACGGGGTATGCATACCCTAATTCGTGATTCTCAAACAACGAAGcatgattttgtattttatgctGACCGATTGATCCGTTTGGTTGTTGAACATGGCTTGGGGCATCTGCCATTTACAGAAAAGCAAATAATCACTCCAACTGGGTCTGTATACACTGGTGTGGATTTTTGTAAGAGGTTATGTGGTGTCTCCGTTATCAGGAGTGGGGAAAGTATGGAGAATGCTTTACGAGCATGCTGTAAGGGTATCAAGATTGGAAAAATTCTTATACACAGAGAGGGTGATAATGGCCAGCAGTTGATATATGAAAAGTTGCCTAATGATATCTCTGATAGGCATGTGTTGCTATTGGATCCTATCCTAGGCACAGGTAATTCGGCTGTTCAAGCAATTtctttacttataaaaaaaggtGTACCGGAGTCCAACATCATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTGTGCAAGAGATTcccaagaataaaaattgtgaCATCTGAGATTGAAATTGgtttaaataaagattttcGAGTCATACCCGGCATGGGTGAGTTTGGGGACCGGTACTTTGGAACAGATGATGATGACCAGCAGGTGGTGGCCCCTTCACAATA 1499 0.3936 MGTKSVVDLLESSSEVHFSGFHMDGLDQRTSGIEQPTTSEAEHMSKQPFVIGLIFHGVAGGAASGKTTVCNMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPDAFDTEQLLCVMDKLRHGQAVDIPNYDFKSYKSDIYPARRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTVEKCRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIEIGLNKDFRVIPGMGEFGDRYFGTDDDDQQVVAPSQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02581 484 Pfam Uracil phosphoribosyltransferase 271 472 - -
Bva12g02581 484 PANTHER URIDINE KINASE 15 475 - -
Bva12g02581 484 Gene3D - 257 472 IPR029057 -
Bva12g02581 484 SUPERFAMILY PRTase-like 256 473 IPR029057 -
Bva12g02581 484 CDD PRTases_typeI 330 445 IPR000836 -
Bva12g02581 484 CDD UMPK 57 253 IPR000764 -
Bva12g02581 484 Gene3D - 45 256 IPR027417 -
Bva12g02581 484 Pfam Phosphoribulokinase / Uridine kinase family 57 241 IPR006083 GO:0005524|GO:0016301
Bva12g02581 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 246 IPR027417 -
Bva12g02581 484 PANTHER URIDINE KINASE 15 475 - -
Bva12g02581 484 TIGRFAM udk: uridine kinase 54 253 IPR000764 -
Bva12g02581 484 PRINTS Uridine kinase signature 185 195 - -
Bva12g02581 484 PRINTS Uridine kinase signature 53 70 - -
Bva12g02581 484 PRINTS Uridine kinase signature 83 94 - -
Bva12g02581 484 PRINTS Uridine kinase signature 128 143 - -
Bva12g02581 484 PRINTS Uridine kinase signature 199 210 - -
Bva12g02581 484 PRINTS Uridine kinase signature 221 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02581 Bva-Chr12 19169368 19175906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02581 1 475 PRT Gene Family AT4G26510 83.925 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02581 K00876 - gmx:100798205 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01170 12 11190057 11197357 Bva12g02581 12 19169368 19175906 BWGD
Bva12g02581 12 19169368 19175906 Bva12g02581 12 19169368 19175906 ECH