Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02580 ATGTCTGCCTTCGTGGGAAAATATGCAGACGAACTTATCAAGAATGCCAAGTACATAGCCACACCAGGGAAGGGCATTTTGGCAGCTGATGAGAGCACTGGCACCATTGGAAAGCGTCTATCCAGCATCAACGTTGAGAACATTGAGTCCAACCGCCAAGTTCTCCGTGAGCTTCTCTTCACCGCTCCCAACGCTCTCCAATACCTCTCCGGCGTCATCCTCTTCGAGGAAACTCTTTACCAGAAAACCTATGATGGAAAACCATTCGTTGATGTCCTTCTAGAGAACAATGTCTTGCCAGGCATCAAAGTTGACAAGGGCATTGTCGAAATCGCTGGTACAAATGGCGAGACCACCACACAAGGCTTGGACTCGCTTGGAGCTAGGTGCCAGCAGTACTACAAAGCTGGTGCTCGGTTTGCTAAGTGGCGAGCAGTACTCAAGATTGGCCCTAACGAGCCATCTGAAACGTCCATCTACCAGAATGCACATGGCTTGGCTCGCTACGCCATCATTTGCCAGGAGAATGGACTTGTTCCCATCGTTGAGCCTGAGATTTTAACTGATGGACCTCATGACATCAAAAAATGTGCTGCTGTCACTGAACGTGTGCTTGCAGCTGTTTACAAGGCACTCAATGATCAACATGTTCTTCTTGAAGGCACTCTTCTTAAGCCCAACATGGTCAACCCCGGCTCTGATAGCCCAAAGGTACCACCAGAGGTGGTTGCAGAGTACACAGTTGCTGCACTGCGTAGAACTGTTCCGGCTGCAGTGCCGGGGATTGTGTTTTTGTCAGGTGGACAAAGCGAAGAAGAAGCCACGCTGAACCTCAACGCGATGAACAAGTTGGAGGTGTTGAAGCCATGGACACTGTCCTTCTCATTTGGTCGAGCACTGCAGCAAAGCACACTCAAGACATGGGCTGGAAAGAAGGAGAATATTGGAAAAGCTCAAGAGGCATTTTTGGTGAGGTGCAAGGCCAACTCTGAGGCTACACTTGGAAAATATGGTGGTGGAAGCACCGGTGGTCTCGCTTCTGAGAGTTTGTTCGTCAAGGATTACAAGTATTA 1073 0.493 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLSSINVENIESNRQVLRELLFTAPNALQYLSGVILFEETLYQKTYDGKPFVDVLLENNVLPGIKVDKGIVEIAGTNGETTTQGLDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSETSIYQNAHGLARYAIICQENGLVPIVEPEILTDGPHDIKKCAAVTERVLAAVYKALNDQHVLLEGTLLKPNMVNPGSDSPKVPPEVVAEYTVAALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWAGKKENIGKAQEAFLVRCKANSEATLGKYGGGSTGGLASESLFVKDYKY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02580 357 Pfam Fructose-bisphosphate aldolase class-I 11 357 IPR000741 GO:0004332|GO:0006096
Bva12g02580 357 CDD FBP_aldolase_I_a 9 334 - -
Bva12g02580 357 SUPERFAMILY Aldolase 3 357 - -
Bva12g02580 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 5, CYTOSOLIC-RELATED 1 357 - -
Bva12g02580 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 1 357 IPR000741 GO:0004332|GO:0006096
Bva12g02580 357 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 217 227 IPR029768 -
Bva12g02580 357 Gene3D Aldolase class I 1 357 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02580 Bva-Chr12 19166559 19168817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02580 1 357 Miscellaneous Gene Families AT3G52930 80.447 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02580 K01623 - qsu:111992150 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02580 12 19166559 19168817 Bva12g02580 12 19166559 19168817 ECH