Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02578 ATGCTGTGCTTTTGGTACATGGCAAGGTTTAAGAGCTCAATTCTTTATTGCTTCTCCTTTAAGCATTCAAGTTCTGGAGGGTCTGGTCAAATGGTCAATCCAATAAAAAGGGGTAGGACTAAAGCAGCATATCAGTTATCATACGGCATCGTTTCATGGTATCAGAACTGTGAAGCTGAAGACTTAGGATGTTTAATCACTAAGgaaGGGAAAAAGCAGAGTGAAGAAGCAACAGAAAAATGGATCAAATACTATTCATCAAATCATCAAATACTGTTGGTGGGAGAGGGTgatttctccttctctctttGCTTGGCTCACTCTTTTGCGTCTGCTTCCAACATCGTTGCTTCTTCTCTTGATTCATATGATGATGTTACCAAGAAATACAAGGAAGCCAAgtcaaatttggaaaatttggaaaagcTGGGAGCATGCTTGTTACATGAATTGGATGCAACCAAAATGGAGCTTCACCCAGATTTGCGAATGCGGAGATTTGATAGAGTTATCTTCAACTTTCCTCATGCTGGCTTTCATGGGAAGGAAGACAACCCTTCACTGATTGAGAAACACAAGGCCCTTGTGCATGGTTTCTTCACAAATGCAAAGGCCTTGCTCCGAGCCAATGGTGAAATTCATGTTAATCATAAAACTGAAGTTCCTTATAGTAACTGGAACTTAGAGAAACTTGCTTCGCAAAGCTCTCTGTTGCTGATCAAATGCGCTGATTTCAAGAAAGACGATTACCCTGGTTATAACAACAAGCGAGGTGCTAGTTTAAGATGTGATGAACCCTTCCCGTTGGGTAAGTGCTGCACTTTTAAGTTCATTGACAATCCCAGAGCTATACAACAGAGAAATCCACCACGCCAAGAGAGTCAGGTTCTGCAACGGCCAACCCCAGTTGGTCTCAATTATTTTCCTCAAACGAGTCATATTCTAAAAATGAACGCAGGATTGCCATTGGCGACTAGTTCTAGAAATGAACACTATCAGATTTTTGGTGGCAATTCGGATAGTGTGTTAAAAATACAAGGAACTACTCCTGATGGTATTATTTTGGTCGTAGAATG 1076 0.3931 MLCFWYMARFKSSILYCFSFKHSSSGGSGQMVNPIKRGRTKAAYQLSYGIVSWYQNCEAEDLGCLITKEGKKQSEEATEKWIKYYSSNHQILLVGEGDFSFSLCLAHSFASASNIVASSLDSYDDVTKKYKEAKSNLENLEKLGACLLHELDATKMELHPDLRMRRFDRVIFNFPHAGFHGKEDNPSLIEKHKALVHGFFTNAKALLRANGEIHVNHKTEVPYSNWNLEKLASQSSLLLIKCADFKKDDYPGYNNKRGASLRCDEPFPLGKCCTFKFIDNPRAIQQRNPPRQESQVLQRPTPVGLNYFPQTSHILKMNAGLPLATSSRNEHYQIFGGNSDSVLKIQGTTPDGIILVVE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02578 358 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 92 257 IPR019446 GO:0070042|GO:0070475
Bva12g02578 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 225 IPR029063 -
Bva12g02578 358 PANTHER BNAC06G26310D PROTEIN 75 278 - -
Bva12g02578 358 Coils Coil 123 150 - -
Bva12g02578 358 PANTHER PHENYLALANYL-TRNA SYNTHETASE 75 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02578 Bva-Chr12 19158938 19162562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02578 - - gmx:100802899 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02578 12 19158938 19162562 Bva12g02578 12 19158938 19162562 ECH