Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02575 ATGAACGATTCTGCTTACAGAGTTGAAACTACTTCTCGTCTCGCACAATGGAGAATCGAAAACTTAGCTTCCTGTACTTACCGCAAATCCGATCCTTTCAAGATCGGCAAGTGGAATTGGCATCTGTCCATTGAGAAGAACCGGGTTTTGTTTGTTAAATTATACCCAGAAATATCCATTCTAACAAGGGATAATCCTCCAATTgcatctttcttcattcgCGTGGTTAGTTCTGCAGGAGACCGCAAGGCCTTGACTCATCCAGAAATTAAAGACAAGAAGCTCAAGAACAACGAAGACTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATCATTGACGTTGAGTTCCTTGATTTGAAGACAGCATCCCCGGACGGTGGAGAACCTTGCACCATCTGGGCTGAGGGATTTACGCAGAAAAGTTCAAATGCTTCAGCTCTTGAATCTCTAGGTCGAATGCTAACAGAAGGAATCCACACAGACATATCGATAAATGCTTCAAATGGAAGCATTGGAGCTCATCGTGCTGTTCTTGCTGCTCGGTCATCTGTCTTCCGCAGCATGTTCTCCCATGATCTCAAGGAGAAGGAGTTATCAACCATAGACATCTCAGACATGTCAATTGAAGCTTGCCAGGCATTTCTCAATTATCTCTATGGAAACATCAAACATGAAGAGTTTCTGATATATAGGCTGGTCCTTCTGCACGCAGCTGATAAGTATGACATATCTGACTTAAGAGATGCATGCCATGACAGTCTTCTTGAAGATATTGATGCTAAGAATGTCCTTGAGAGACTCCAAAATGCATATCTGTATCAATTGCCAAAACTGAAGACTAGCTGTATGCGATATCTTGTCAAATTTGGTAAAATATTTGACATTCACGATGATTTTAGTGCCTTCCTGCAATGTGCAGACAGGGAACTTATAACTGAAGTCTTCCATGAAGTTCTGAATGCTTGGAAAGGATTCTA 986 0.4087 MNDSAYRVETTSRLAQWRIENLASCTYRKSDPFKIGKWNWHLSIEKNRVLFVKLYPEISILTRDNPPIASFFIRVVSSAGDRKALTHPEIKDKKLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPDGGEPCTIWAEGFTQKSSNASALESLGRMLTEGIHTDISINASNGSIGAHRAVLAARSSVFRSMFSHDLKEKELSTIDISDMSIEACQAFLNYLYGNIKHEEFLIYRLVLLHAADKYDISDLRDACHDSLLEDIDAKNVLERLQNAYLYQLPKLKTSCMRYLVKFGKIFDIHDDFSAFLQCADRELITEVFHEVLNAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02575 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Bva12g02575 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Bva12g02575 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
Bva12g02575 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Bva12g02575 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Bva12g02575 328 Gene3D Potassium Channel Kv1.1; Chain A 139 291 IPR011333 -
Bva12g02575 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Bva12g02575 328 SUPERFAMILY POZ domain 145 259 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02575 Bva-Chr12 19151452 19153907 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g02575 BTB 1.8e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02575 K10523 - cit:102607532 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02575 12 19151452 19153907 Bva12g02575 12 19151452 19153907 ECH