Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02564 ATGGAATCCATCAATGGAAGACCAATAGAAGAGACTGATGATAAGCGTCCTCTTAGCCAGGAAATAACTGCTGAGAAGTCAGAATCTATTCTGGTTGATGAACATGGAGGATCGCGGGCCACTTTATGCGAAATGTTTAGGGGTATTGACATTGTGTACAAAAGTATACAAACTGTAGTTTTCTCTAACAAACTCAACTTGCTCATGCCTTTTGGGCCTTTGGCCATTCTTGTGCAGAATTTGACTGGCCATCATGGTTGGGTCTTTGCTCTGAGTTTGTTTGGGATAACGCCTCTGGCCGAGCGGTTAGGTTATGCTACGGAGCAGCTGGCTTTTTACACGGGAGACACTGTTGGGGGTCTTCTAAATGCTACTTTTGGAAATGCAACTGAATTGATCATCTCAATATATGCACTGAAAAGCGGAATGACACGAGTCGTTCAGCTTTCTTTACTTGGctcaattttgtcaaatatgtTGCTAGTGCTCGGATGTGCATTCTTGAGCGGTGGAATTGTTATCAACAAGAAGGAACAGGTTTTTAACAAGGCCTGTGCTTCTGTAAATATGGGATTATTGTTGATGGCTGTCATGGGCCTTCTTTTTCCTGCCGTTCTCCACTACACGCACACCGAGGTGCATTTTGGGACGTCAGAGTTGGCCCTTTCAAGATTTAGCAGCTGCGTCATGCTGGTGGCATATGTTGCATACCTGTTTTTCCAGTTAAGAAGTCATACAAGTCTCTATACTTCTCTTAACGAGGAAGAAGGTCAGAGTGGAAACACCGCAGAATCGCCAGATATCTGTAAATGGGAATCAATAATTTGGCTTTCCATTTTGACTGTTTGGATATCAGTCTTGTCAGAATATTTGGTTGGTGCGATAGAGGGAGCATCTACTGCCTGGAAAATGCCGGTAGCATTTATCAGCGTCATATTGCTTCCAATTGTAGGGAATGCCGCAGAGCATGCTAGTGCTATTATGTTTGCCATGAAAGATAAGCTTGATATTTCTTTAGGAGTAGCAATAGGATCATCCACACAGATAGCAATGTTTGCGATACCATTGTGTGTGTTAGTTGGATGGATAATGGGACGCCCCATGGACTTAAACTTTCGACTTTTCGAGACAGCAACGCTATTCGTAACAGTTATAGTAGTAGCCTTCTTTTTGCAGGAAGGAACTTCCAATTACCTGAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTCGCAGCAAGCTTTTTCGTACACGTAGATTCCTCTTG 1268 0.4243 MESINGRPIEETDDKRPLSQEITAEKSESILVDEHGGSRATLCEMFRGIDIVYKSIQTVVFSNKLNLLMPFGPLAILVQNLTGHHGWVFALSLFGITPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLSGGIVINKKEQVFNKACASVNMGLLLMAVMGLLFPAVLHYTHTEVHFGTSELALSRFSSCVMLVAYVAYLFFQLRSHTSLYTSLNEEEGQSGNTAESPDICKWESIIWLSILTVWISVLSEYLVGAIEGASTAWKMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQIAMFAIPLCVLVGWIMGRPMDLNFRLFETATLFVTVIVVAFFLQEGTSNYLKGLMLILCYLIVAASFFVHVDSS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02564 422 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g02564 422 Pfam Sodium/calcium exchanger protein 274 413 IPR004837 GO:0016021|GO:0055085
Bva12g02564 422 Pfam Sodium/calcium exchanger protein 87 242 IPR004837 GO:0016021|GO:0055085
Bva12g02564 422 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 421 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva12g02564 422 TIGRFAM caca2: calcium/proton exchanger 54 416 - -
Bva12g02564 422 TIGRFAM cax: calcium/proton exchanger 69 416 IPR004798 GO:0006816|GO:0015369
Bva12g02564 422 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 7 421 - -
Bva12g02564 422 Gene3D - 114 417 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02564 Bva-Chr12 19102489 19105540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02564 9 420 Antiporters AT1G55730 70.504 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02564 K07300 - gmx:100799276 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02564 12 19102489 19105540 Bva12g02564 12 19102489 19105540 ECH