Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02546 ATGCCTGCAACAGAAGCCAATGATTTTCTcttgctttttcttccttttctctttatcaTTTTGGTAGAAGGCCAGCAAGACTTGACCCCTAAATCTTCTGATGAGATTTTAGGGGTAGGGAAAGGGACTTATTCCCTACATTCTATTACTGATTCATCCATAATAGGATACAAATTGGTCCCAAATCACATATGGgTGTGGCTTTTCCCTGTGGAGATCAGATACGAGAATAAGGTCGAGCCACCTTCTCTGTTCTCCTCAAGAGCAACCATGGCAGATGAAACgcaaaatgaaatgaaggaGGAGGTGCCAGAAATAGTCCCCTTTGATCCtactaagaagaagaagaaaaagaaagttacaaTTCAAGATGCTGCTGATGATTCAGCAGACAAGTTGGcagagaaaacagaaaacttGTCCATTTCTGATGGGGTTGAAACGGCCACATTTACTggtttgaaaaagaagaagaagaagcctGTTGAACCTAGTAACTTGAATGATGAGAGTGGAGATGCAGGTGAAGATCTTGATGATCACATTGGAGAGGAAGATGGAGAAAGTAGTGTCCTGCAGCCTCGTTTTCCTTGGGAAGGGAGCGATCGTGATTATGAATATGAGGAgCTGCTTGGGAGGGTATTCAACATTCTACGTGAACATAATCCTGAACTGGCTGGAGATCGGCGGAGGACTGTCATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTCAACTTCATGGATCTATGCAAGACGATGCATCGACAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCACTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTCGCACCGAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTTATTTGCCTTGGATGTAAGAGTCCAGACACCATACTTTCGAAGGAGAACCGTCTATTCTTTCTCAGATGCGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCAGGGGCATG 1079 0.4022 MPATEANDFLLLFLPFLFIILVEGQQDLTPKSSDEILGVGKGTYSLHSITDSSIIGYKLVPNHIWVWLFPVEIRYENKVEPPSLFSSRATMADETQNEMKEEVPEIVPFDPTKKKKKKKVTIQDAADDSADKLAEKTENLSISDGVETATFTGLKKKKKKPVEPSNLNDESGDAGEDLDDHIGEEDGESSVLQPRFPWEGSDRDYEYEELLGRVFNILREHNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02546 359 Pfam Domain found in IF2B/IF5 229 337 IPR002735 GO:0003743|GO:0006413
Bva12g02546 359 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 91 358 IPR045196 GO:0003743|GO:0006413
Bva12g02546 359 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 308 343 IPR016190 GO:0003743|GO:0006413
Bva12g02546 359 MobiDBLite consensus disorder prediction 153 198 - -
Bva12g02546 359 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 91 358 - -
Bva12g02546 359 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 204 311 IPR016189 GO:0003743|GO:0006413
Bva12g02546 359 MobiDBLite consensus disorder prediction 170 184 - -
Bva12g02546 359 SMART eIF2Bneu4 229 338 IPR002735 GO:0003743|GO:0006413
Bva12g02546 359 Gene3D - 202 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02546 Bva-Chr12 18960097 18968315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02546 91 355 Eukaryotic Initiation Factors Gene Family AT5G20920 77.612 2.81e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02546 K03238 - zju:107411571 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02546 12 18960097 18968315 Bva12g02546 12 18960097 18968315 ECH