Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02477 ATGGTTCTCTCCAAAACCGCCTCCCAATCGGACGTGTCCGTCCACTCAACGTTCGCTTCTCGTTACGTCCGCACCTCGCTTCCGAGGTTCAAGATGCCGGAGGAGTCGATTCCGAAGGAGGCAGCGTACCAGATCATAAACGACGAGCTGATGCTTGACGGAAACCCGAGGCTGAACCTGGCTTCATTCGTGACCACGTGGATGGAGCCTGAGTGCGATAAACTCATCATGGCTTCCATTAACAAGAACTACGTTGACATGGATGAGTATCCTGTCACCACTGAACTCCAGAACCGGTGTGTTAACATGATAGCTCATCTCTTCAATGCACCACTTGAAGAGTCAGAGACTGCGGTTGGGGTTGGCACCGTTGGTTCATCGGAGGCCATAATGTTGGCAGGATTAGCATTCAAGAGGAAGTGGCAGAACAAAAGGAAAGCAGCAGGATTGCCTTATGACAAGCCCAACATTGTTACCGGTGCCAATGTTCAGGTCTGTTGGGAGAAATTCGCAAGGTACTTCGAAGTGGAGTTGAAGGAAGTGAAGCTTAGGGATGGATACTACGTGATGGACCCTGAGAAAGCAGCAGAAATGGTGGACGAGAACACCATCTGTGTTGCTGCTATTCTTGGTTCCACACTCAATGGAGAGTTCGAAGATGTCAAACGTTTGAATGATCTCTTAGTCGAAAAGAACAAGGAAACTGGATGGGATACTCCAATTCACGTGGATGCAGCAAGTGGTGGCTTCATTGCTCCATTTATTTATCCAGAGCTTGAATGGGATTTCCGGTTGCCACTTGTGAAGAGCATCAACGTTAGTGGCCACAAGTATGGACTTGTCTATGCCGGAATTGGTTGGGTCATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAACTCATCTTCCACATCAACTATCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTccaaagGTTCTAGTCAAGTTATTGCTCAGTACTACCAACTAATTCGCTTGGGTTATGAGGGATATAGGAATGTGATGGAAAACTGTAGAGACAATATGATTGTACTCAAAGAGGGACTCTTGAACACTGGACGTTTCGACATTGTATCCAAAGATGACGGAGTACCTTTGGTGGCATTTACATTGAAGGATCACAGCCACTTTGATGAGTTCCAAGTCTCAGACTTGTTGAGGCGCTTTGGGTGGATAGTGCCAGCATACACCATGCCTCCTGATGCCCAGCATGTGACCGTGCTTCGTGTTGTGATCAGAGAGGACTTTTCACGAACACTTGCTGAGCGTCTTGTGGTTGACATCCAGAAAGTGTTGCACGAGCTGGATTCGCTTCCTGTAAAGATTGCCCATGCCGCTACTCTAGCTGTTAATAGCGAAGAAATCGCTAGTAATGGCACTACAGCCAAAATTGCTAAGAAGACTGCTGAGGAGACAACAAGGGAAATCACCAAAGCATGGAAGAAATTTGTGATGGAcaggaagaagatgaatggCGTTTGCTA 1511 0.4679 MVLSKTASQSDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAAGLPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLLNTGRFDIVSKDDGVPLVAFTLKDHSHFDEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVVDIQKVLHELDSLPVKIAHAATLAVNSEEIASNGTTAKIAKKTAEETTREITKAWKKFVMDRKKMNGVC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02477 503 Gene3D - 361 448 - -
Bva12g02477 503 Gene3D - 1 65 - -
Bva12g02477 503 Gene3D - 66 359 IPR015421 GO:0003824
Bva12g02477 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
Bva12g02477 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva12g02477 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bva12g02477 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva12g02477 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02477 Bva-Chr12 18620650 18624839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02477 1 503 Calmodulin-binding Proteins AT5G17330 84.294 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02477 K01580 - gmx:100796533 908.286