Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02464 atgaagagaaaaacTAAAGCCCATCTGGGTTTCGAGCTTTTAGCCATTTTCCTTGTTGGGTTCTCCTCAGTCTTACTTTGTGTTGAGGCTGAAAGCCAAGATGCTGATGTAATGTTAGCTCTCAAGAAGAGCCTCAACGTTCCTCAGTCTCTTGGGTGGTCTGATCCCGACCCCTGCAACTGGAACCACGTTGGTTGCTCCAGGGATAGACGAATCACGCGGATCCAAGTCGGCCATCAAGGCCTTACAGGTACACTTCCACCGAATCTTCAGAATCTTACAGCGTTGGAAGTTTTGGAGCTCCAATATAATAACATTTCGGGTCCTCTTCCTAGCTTAAGTGGGTTAAGTTCATTGCGAGAAATTTTGCTTGATGACAATCTGTTTGAATCAATCCCAAGCGACTTTTTTACTGGTATGTCTTTGCTTCAAAACGTTGATATTGACAATAACCCCTTTTCGGATTGGGAAATACCTGAAAGTCTCAAAGATGCTACGGAACTTCAGAGCTTTTCAGCGAACTCTGCGAATATTAAAGGCAAAATAccagatttttttaatcaggATGTGTTTTCTAGTCTGACAAGTTTGCATTTGGCTGGCAATAACCTTGAGGGTGGGTTACCTGCGAGCTTTGGTGGTATGCAAATTCAGTCCTTGTGGCTTAATGGGCAAAAGAGTAAGCTTTTTGGATCTATAGATGTTATACAGAAAATGACTTCCTTACAAGAGGTTTGgttgaatttgaataatttttcgGGTCCATTACCAGACTTTTCGGGTTTGAAAGATTTGCAGAATTTGAGTTTGAGGGATAATATGCTTACCGGTCCTGTTCCAGCTTCATTGCTGAGCCTTCCGTCACTAAAAGTTGTAAATTTGACTAATAACATGCTTCAAGGGCCAATGCCAGTATTTAAAGCAGGGGTTACTGTGGATATGAGCAAGGGTTCAAATAGGTTTTGCTTACCAAGCCCTGGGGATTGTGATCCACGAGTTAATACTCTTCTTTCTATTGTTGAATTAATGGGCTATCCTCAAAGCTTTGCTGATAGTTGGAATGGGAATGATCCATGCCAGGATTGGATTGGCATTACCTGTATTGATGGGAACATTACTGTTGTGAATTTTCAGAGGATGGGTCTGACGGGTACAATATCTCCTGCATTTGCCTCACTTCCATCGCTGCAAAGAATAATTCTTGCTGATAACAATCTCACTGGTACGATTCCAGAGAAACTTACCAGTCTGCCTCTGCTCACTGAACTGAATGTTGCCAACAATCAGCTTTATGGAAAAGTCCCAACTTTTAGGAGCAATATAAATTTGGTAACAACTGGTAACAAAGATATAGGGAAGGATAAAAGCAGTTCACCCCCTAGTGGTGCACCATCTTCAGGCTCAAGTCCGACTGATACTGGTGGAAGTTCTGGAACTGGTGGCAAAAAATCTACTGCTCATGTTGGACTGATTGTGCTTGCTGTAATTGGGAGCGTATTGGCAGTTTGCTTGATTGGTTTCATAGCTTTCTGCTGGTTTAGAATGAGACAAAAGCGGTTAAGCCAGGTGCAGAGCCCAAATGCACTAGTTGTTCACCCCCGTCATTCTGGATCAGATAATGAAAGCATGAAGATAACAGTTGCTGGCTCAAGTGTTAGTGTTGGTGCAGTTAGTGAAGCACAAACCTTACCAAGTAGTGAGGCAGGAGATATCCAAATGGTAGAAGCAGGAAACATGGTGATTTCTATACAAGTTCTGAGGACTGTTACTGACAACTTcagtgagaaaaatatattgggACAGGGAGGTTTTGGAACAGTTTATAAAGAAGGAAAAGCCTCAATAGAAACAAGAATTGCTGGAACTTTTGGATATTTGGCACCAGAATATGCAgTTACTGGCCGCGTGACAACTAAAGTTGATGTATATAGTTTTGGGGTAATATTGATGGAACTGATAACGGGAAGGAAAGCACTAGACGAGACCCAACCTGAGGACAGCATGCACCTTGTAACGTGGTTCCGCAGAATGTACATTAACAAAGACACTTTCAAAAAGGCCATTGACCCCACAATTGAGCTCAACGAAGAAACCCTTGCTAGTATTCACACCGTAGCAGAGTTAGCTGGCCACTGCTGTGCAAGAGAGCCTTATCAAAGACCAGACATGGGTCATGCTGTTAATGTGCTTTCTTCTCTTGTAGAACTCTGGAAACCATCTGATCAGAACTCTGAAGATATATTATATGGCATTGACCTTGACATGTCTTTACCCCAAGCACTTAAGAAGTGGCAGGCTTTTGAAGGTAGAAGCCAAATGGagtcttcatcttcttcccttCTTCCGAGCTTGGACAACACACAGACAAGCATACCAACACGGCCATATGGTTTTGCCGACTCTTTCACATCAGCAGATGGGAGATG 2426 0.4134 MKRKTKAHLGFELLAIFLVGFSSVLLCVEAESQDADVMLALKKSLNVPQSLGWSDPDPCNWNHVGCSRDRRITRIQVGHQGLTGTLPPNLQNLTALEVLELQYNNISGPLPSLSGLSSLREILLDDNLFESIPSDFFTGMSLLQNVDIDNNPFSDWEIPESLKDATELQSFSANSANIKGKIPDFFNQDVFSSLTSLHLAGNNLEGGLPASFGGMQIQSLWLNGQKSKLFGSIDVIQKMTSLQEVWLNLNNFSGPLPDFSGLKDLQNLSLRDNMLTGPVPASLLSLPSLKVVNLTNNMLQGPMPVFKAGVTVDMSKGSNRFCLPSPGDCDPRVNTLLSIVELMGYPQSFADSWNGNDPCQDWIGITCIDGNITVVNFQRMGLTGTISPAFASLPSLQRIILADNNLTGTIPEKLTSLPLLTELNVANNQLYGKVPTFRSNINLVTTGNKDIGKDKSSSPPSGAPSSGSSPTDTGGSSGTGGKKSTAHVGLIVLAVIGSVLAVCLIGFIAFCWFRMRQKRLSQVQSPNALVVHPRHSGSDNESMKITVAGSSVSVGAVSEAQTLPSSEAGDIQMVEAGNMVISIQVLRTVTDNFSEKNILGQGGFGTVYKEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKALDETQPEDSMHLVTWFRRMYINKDTFKKAIDPTIELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDILYGIDLDMSLPQALKKWQAFEGRSQMESSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02464 808 Pfam Leucine rich repeat N-terminal domain 334 367 IPR013210 -
Bva12g02464 808 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Bva12g02464 808 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Bva12g02464 808 PANTHER OSJNBA0070M12.3 PROTEIN 610 808 - -
Bva12g02464 808 PANTHER OSJNBA0070M12.3 PROTEIN 15 609 - -
Bva12g02464 808 Pfam Protein kinase domain 617 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02464 808 SUPERFAMILY L domain-like 47 444 - -
Bva12g02464 808 MobiDBLite consensus disorder prediction 774 797 - -
Bva12g02464 808 Gene3D Ribonuclease Inhibitor 31 329 IPR032675 -
Bva12g02464 808 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
Bva12g02464 808 Gene3D Transferase(Phosphotransferase) domain 1 589 750 - -
Bva12g02464 808 MobiDBLite consensus disorder prediction 448 481 - -
Bva12g02464 808 SMART LRR_typ_2 393 417 IPR003591 -
Bva12g02464 808 SMART LRR_typ_2 116 139 IPR003591 -
Bva12g02464 808 SMART LRR_typ_2 191 214 IPR003591 -
Bva12g02464 808 SMART LRR_typ_2 93 115 IPR003591 -
Bva12g02464 808 MobiDBLite consensus disorder prediction 774 808 - -
Bva12g02464 808 PANTHER RECEPTOR PROTEIN KINASE TMK1 610 808 - -
Bva12g02464 808 PANTHER RECEPTOR PROTEIN KINASE TMK1 15 609 - -
Bva12g02464 808 SUPERFAMILY Protein kinase-like (PK-like) 616 738 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02464 Bva-Chr12 18539198 18542841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02464 611 742 Receptor kinase-like Gene Family AT5G65700 39.098 3.81e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva12g02464 Pkinase 1.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02464 K00924 - aprc:113846741 780.015