Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02463 ATGAAAGAGACTAAAGCCCATATGATCAGTTTTGAGCTTTTAGCCATTTTCCTTGCTGTGTTCTGCTCAGTCTTCCTGTGTGTTGAGGCTCAAAGCCAAGATGCTGATGTAATGTTAGCTCTCAAGAAGAGCCTCAACGTTCCTCAGTCTCTTGGGTGGTCTGATACCGACCCCTGCAACTGGAACCACGTTGGTTGCTCCAGGGATAGACGAATCACGCGGATCCAAATCGGCCATCAAGGCCTTACAGGTACGCTTCCACCGAATCTTCAGAATCTTACAGCGTTGGAAGTTTTGGAGCTCCAATATAACAACATTTCGGGTCCTCTTCCTAGCTTAAATGGGTTAAGTTCATTGCAAGAAGTTTTGCTTTTTGACAATCAATTTGAGTCTATCCCTAGCGACTTTTTTACTGGTATGTCCTCGCTTGAAACCGTGGATATTGACAACAATCCTTTTTCGGATTGGGAAATACCTGAAAGTCTCAAAGACGCTACGCTACTTCGGAGTTTTTCAGCGAACGCAGCGAATATTAAAGGCAAAATAccagatttttttaatgcgGATGTGTTTTCTTCTCTGAAAAGTTTGCACTTGGCTGGCAATAACCTTGAGGGTGGGTTACCTGCGAGCTTTGGTGGTATGCAAATTCAGTCCTTGTGGCTTAATGGGCAAAAGAGTATGCTTTTTGGATCTATAGATGTTATACAGAAAATGACTTCCTTACAAGATGTTTCGTTGAGCAGGAATAATTTTTCGGGTCCATTAACAGACTTTTCGGGTTTGAAAGATTTACAGAATGTGAGTTTGAGGGATAATATGCTTACCGGTCCTGTTCCAGCTTCATTGCTGAGCCTTCCGTCACTAAAAGTTGTAAATTTGACTAATAACATGCTTCAAGGGCCATTGCCAGTATTTAAAGCAGGGGTTACTGTGGATATGAGCAAGGGTTCAAATAGGTTTTGCTTACCAAGCCCTGGGAATTGTGATCCACGAGTTAATACTCTTCTTTCTATTGTTGAATTAATGGGCTATCCTCAAAGCTTTGCTGATAGTTGGAATGGCAATGATCCATGCCAGGATTGGATTGGCATTATCTGTAATGATGAGAACATTACTGTTGTGTATTTTCAGAAGATGGGTCTGACGGGTACAATATCTCCTGCTTTTGCCTCACTTCCATCGCTGCGAAGAATAATTCTTGCTGATAACAATCTCACTGGGAAGGATAAAAGCAGTTCACCCCCTAGTGGTGCACCATCTTCAGGCTCTAGTCCGACTGATACTGGTGGCAAAAAATCTTCTACTCATGTTGGAGTAATTGTGCTTGCTGTAATTGGGAGCCTGTTTGTGGTTTGCTTGTTTGGTTCCATAGTGTTCTGCTGGTTTAGAATGAAACGAAAGTGGTTAAGCTGTCACCCATGTCATTCTGGATCAGATAATGAAAGCATGAAGGTAACAGTTGCTGGCTCAAGTGTTAGTATTGGTGCAGTTAGTGAAGCGCAAAGAAGAGAGGCAGGAGATATCCAAATGGTCGAAGCAGGAAACGTGATCATTTCAATACAAGTTCTGAGGACTGTTACTGAAAATTTcagtgagaaaaatatattgggACAGGGAGAAGGAAAATCCTCAATAGAAACAAGAATTGCTGGAACTTTTGGATATTTGGCACcaaaatatgcaaTTGCTGGTAGTGTGACAACTAAGGTTGATTTATACAGTTTTGGAGTAATATTGATGGAACTGATAACGGGAAGGAAAGCACTAGACGAGACTCAATCTGAGGATAGCATGCACCTTGAAACATGGTTCCGCAGAATCTTCATTAACGAAGACACATTCAGAAAGGCCATTGACCCCACAATAGAGCTCAATGAGGAAACCCTTGCTAGTATTCACACTGTAGCTGAGTTAGCTGGGCATTGCTGTGCAAGAAAGCCCCATCAAAGGCCAGACATGGGTCGTGTTGTTAATGTGCTTTCTTCTCTTGTAGAACTCTGGAAACCATCTGATCAGATTCAGAACTCTGAAGATGTATCCGATATTGACCTTGACATGTCTTTACCACAAGCACAGAGGAAGTGGCAGACTTATTG 2099 0.414 MKETKAHMISFELLAIFLAVFCSVFLCVEAQSQDADVMLALKKSLNVPQSLGWSDTDPCNWNHVGCSRDRRITRIQIGHQGLTGTLPPNLQNLTALEVLELQYNNISGPLPSLNGLSSLQEVLLFDNQFESIPSDFFTGMSSLETVDIDNNPFSDWEIPESLKDATLLRSFSANAANIKGKIPDFFNADVFSSLKSLHLAGNNLEGGLPASFGGMQIQSLWLNGQKSMLFGSIDVIQKMTSLQDVSLSRNNFSGPLTDFSGLKDLQNVSLRDNMLTGPVPASLLSLPSLKVVNLTNNMLQGPLPVFKAGVTVDMSKGSNRFCLPSPGNCDPRVNTLLSIVELMGYPQSFADSWNGNDPCQDWIGIICNDENITVVYFQKMGLTGTISPAFASLPSLRRIILADNNLTGKDKSSSPPSGAPSSGSSPTDTGGKKSSTHVGVIVLAVIGSLFVVCLFGSIVFCWFRMKRKWLSCHPCHSGSDNESMKVTVAGSSVSIGAVSEAQRREAGDIQMVEAGNVIISIQVLRTVTENFSEKNILGQGEGKSSIETRIAGTFGYLAPKYAIAGSVTTKVDLYSFGVILMELITGRKALDETQSEDSMHLETWFRRIFINEDTFRKAIDPTIELNEETLASIHTVAELAGHCCARKPHQRPDMGRVVNVLSSLVELWKPSDQIQNSEDVSDIDLDMSLPQAQRKWQTY 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02463 699 Pfam Protein kinase domain 547 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02463 699 SUPERFAMILY L domain-like 335 409 - -
Bva12g02463 699 SMART LRR_typ_2 93 115 IPR003591 -
Bva12g02463 699 SMART LRR_typ_2 191 214 IPR003591 -
Bva12g02463 699 SMART LRR_typ_2 140 164 IPR003591 -
Bva12g02463 699 SMART LRR_typ_2 116 139 IPR003591 -
Bva12g02463 699 SMART LRR_typ_2 393 422 IPR003591 -
Bva12g02463 699 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Bva12g02463 699 Pfam Leucine rich repeat N-terminal domain 334 368 IPR013210 -
Bva12g02463 699 SUPERFAMILY L domain-like 40 305 - -
Bva12g02463 699 MobiDBLite consensus disorder prediction 407 432 - -
Bva12g02463 699 Gene3D Ribonuclease Inhibitor 31 329 IPR032675 -
Bva12g02463 699 PANTHER OSJNBA0070M12.3 PROTEIN 541 699 - -
Bva12g02463 699 SUPERFAMILY Protein kinase-like (PK-like) 546 671 IPR011009 -
Bva12g02463 699 PANTHER OSJNBA0070M12.3 PROTEIN 15 409 - -
Bva12g02463 699 PANTHER OSJNBA0070M12.3 PROTEIN 408 540 - -
Bva12g02463 699 PANTHER RECEPTOR PROTEIN KINASE TMK1 15 409 - -
Bva12g02463 699 PANTHER RECEPTOR PROTEIN KINASE TMK1 541 699 - -
Bva12g02463 699 PANTHER RECEPTOR PROTEIN KINASE TMK1 408 540 - -
Bva12g02463 699 Gene3D Ribonuclease Inhibitor 331 420 IPR032675 -
Bva12g02463 699 Gene3D Transferase(Phosphotransferase) domain 1 517 686 - -
Bva12g02463 699 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02463 Bva-Chr12 18533635 18536971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02463 82 661 Receptor kinase-like Gene Family AT1G09970 23.832 3.23e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva12g02463 Pkinase 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02463 - K00924 jre:108988162 629.787