Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02457 ATGTCTTTCTCCCTCATCGAAGCATGCAGAAAGAGAAAACGAAGGCCCAAGGTTTTCAAATTTCACTCTTTCTGTGAACCTGGTTGCCCCATCAGCCCTAAAGGACCTTTCCGAGATAACATTCGCCTCTTTCTTCAAGAATGCGCCGAGCTCGAAGACTACACTGTTAGGGAAATGCCGTTGTGGTGCACCCTCCTTATCCACGAGAAATCAAGCTTCGTGCTCCCTCTCTACACCGTTGAAGAGAACGTTAACCGACTTTTGCATCCCTTCTGCGATCATTGCCGATGTGAAGGTTGGAGTGATCATTTTGTATCGAAGAGAAGGTACCATTTCATAATCCCAATCGACAATGGGTGGCATAAACCCTTAGGTGATGGTGATCTTGATAATCAGACTCATCTCTTGCACGGGATGATTCACTGCAATGGGTATGGACATTTACTCTGCATTAATGGGATCGAAGGTGGTTCCAAACTCCTCACTGGCAGAGAGATCATGGATCTCTGGGACAGAATCTGCACAAATCTTCAAGTAAGCAAAATCGCAGTTGAAGATGCCTCAAGTAAACGGTCTATGGATCTTCGTTTACTTCATGGAGTTGCTTATGGACACTCTTGGTTTGGAAGGTGGGGTTACATATTCAGTCGCGAAAGCTTTGGGGTAACAGACCACAGTTATAATAAAGCAATTGACTTTCTTGGTTCCTTGGAGCTTGATAAGGTCATGCAAGatttttgtaagaaaaattgCAACAAAGAGATCAAACAAATAACTGGGTACTACAGAGATATGAGTGAAACCCCGTTGATCACTGTGAGGGATCTTCTCAGCTTTATGCTCACTGTCAAGTCTCGTGCTCCTGCAGCTAAGAACGCTGTCACCTCggcttcttttcctttttcagttTATTGCTCAAGAAACTCAACTAGAAATCCAATGTCAAACAAGCCAAGTCCGGCGAAGGAAAAAGCTGCTAGGTATAGGAAATTCAGCCCTGCAGTAGCTTATAAGGATAGCAGGTGGCCTGCAAGGAGACTAGAGTATGCAGCTCAAGTGAGGATGCACTG 1070 0.4355 MSFSLIEACRKRKRRPKVFKFHSFCEPGCPISPKGPFRDNIRLFLQECAELEDYTVREMPLWCTLLIHEKSSFVLPLYTVEENVNRLLHPFCDHCRCEGWSDHFVSKRRYHFIIPIDNGWHKPLGDGDLDNQTHLLHGMIHCNGYGHLLCINGIEGGSKLLTGREIMDLWDRICTNLQVSKIAVEDASSKRSMDLRLLHGVAYGHSWFGRWGYIFSRESFGVTDHSYNKAIDFLGSLELDKVMQDFCKKNCNKEIKQITGYYRDMSETPLITVRDLLSFMLTVKSRAPAAKNAVTSASFPFSVYCSRNSTRNPMSNKPSPAKEKAARYRKFSPAVAYKDSRWPARRLEYAAQVRMH 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02457 356 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 353 - -
Bva12g02457 356 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 8 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02457 Bva-Chr12 18522228 18523782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02457 10 332 PHD Transcription Factor Family AT5G22260 36.311 1.37e-56 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02457 - - mtr:MTR_5g077750 492.656