Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02447 ATGAAGTTCCAGCTGCTATTCACCACTCTGgtttttgctttctctctGTATCGCTTCGCCATTGTAGGTGCAGATCTTGCTTCCGATAGAGCTGCCCTTCTGGCTCTTCGGTCCGCCGTGGGTGGACGTTCCCGCTTATGGAACCTCTCCGCAACCAGCCCCTGCTCATCCTGGACTGGGGTCACTTGTCAGAACAATAGAGTCACTCGGTTGCGTCTTCCGGGTATGGGCCTCTCCGGGAACCTTCCTTTGGGAATTGGGAACCTTACGGAACTGCGGACTCTATCTCTCCGTTTCAACGCGCTAACTGGGCCGATTCCATCAGACTTCGTAAAGCTCGTTAACCTTCGGAACCTGTATTTGCAGGGAAATTTCTTCTCTGGTCAAATCCCCGACTTCCTTTTCAATATGCAGAACTTGGTTCGGTTGAATTTAGCTCACAACAATTTTAGTGGTGAGATCTCACCCAAGTTTAATAACCTTACCAGGTTGGTTACCCTCTATTTGGAGAACAATCACCTCACTGGGATCATTCCCAACCTGAATGCCACACCCCTTAATCAGTTGAATGTTTCGGGTAATAACTTAAACGGGTCCATTCCGGAAAGGTTTTCGCGCCTGGACGCCAGTGCTTTTGGAGGTAATTCGCTTTGTGGGGAGCCCTTGCAAGCTTGCCCTGGAACTGGAACTGGAACTGGAACTGGAACAGATAGTGGTTTGTCCGGCGGGGCAATTGCAGGGATTGTAATTGGCTCTTTGATTGGAATTGTGCTAATTCTACTCCTTCTGTTCTTCTTATGTCGAAGAAAGAGCAGTAGGGACAAGGAACCAAAGGATACTGCGCCAGCTAAACATGCCGAGGTCCAAATTCCGGTAGGAAATACGGCTAGAGATAGTGGGAATGCTGGTGCAACTTATTCAGCAACAGCAAAAGGAGATGCAAGGAGTAGTGGGACTAAGAGTTTGGTGTTTTTTGGGAATGTCAATAAGGATTTTGATCTAGAGGATTTGTTGAGGGCATCAGCAGAAGTACTTGGGAAAGGAACCTTTGGAACTACATACAAGGCCACCTTAGAAATGGGGATTGTTTTTGCAGTGAAGAGGTTAAAGGATGTAACTGCACCAGAAAGTGAGTACagagagaaaattgaagaagtaGGGAAGGTGGGTCATGAGAACTTGGTCCCACTCAGAGCTTATTACTATAGCAGGGATGAGAAACTCCTGGTTTATGATTATATGCCCACGGGAAGCTTATCTGCTCTTCTACATGGATCTAGTCCAGCTGGGAGGACTCCACTAAATTGGGAAGCAAGGTCAGGCATTGCCCTTGGTGCTGCACGTGGGATTGCATACCTACACTCACAAGGTCCCAATATCTCCCATGGAAATATCAAGGCATCAAATATTCTTCTGACCAAATCCTTTGAAGCTCGTGTCTCTGACTTTGGCCTTTCTCATGTCGCTCTTCCAACATCTATACCCAACCGTGTTTCTGGTTATCGTGCCCCAGAGGTCACAGATGCTCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGTATAATGCTTTTGGAGCTGCTTACAGGGAAGACTCCCGCTCATTTGTTGAATGAAGAAGGTGTAGACCTTCCGAGATGGGTTCAATCTGTTCAGGACGAGGGGAACACCGAGGTTTTTGACACGGAGCTTCTCAAGCACCAGAATGTTGAGGAGGAAATGGTGAAGATGCTACAGCTTGCACTTGAATGTACTGCTCAATATCCAGACAAGCGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAAGAAGTTTGTCATTCTAATGTAGAAAAAGAGGACGATAAAGAGTTTCATTCATTTAAGGACGCAGAGGATGGATTTTCCCAACAGTACTTCTCTTTTGACTCGACAGGGCCACCACCTTCTATAGAGAATTG 1943 0.4606 MKFQLLFTTLVFAFSLYRFAIVGADLASDRAALLALRSAVGGRSRLWNLSATSPCSSWTGVTCQNNRVTRLRLPGMGLSGNLPLGIGNLTELRTLSLRFNALTGPIPSDFVKLVNLRNLYLQGNFFSGQIPDFLFNMQNLVRLNLAHNNFSGEISPKFNNLTRLVTLYLENNHLTGIIPNLNATPLNQLNVSGNNLNGSIPERFSRLDASAFGGNSLCGEPLQACPGTGTGTGTGTDSGLSGGAIAGIVIGSLIGIVLILLLLFFLCRRKSSRDKEPKDTAPAKHAEVQIPVGNTARDSGNAGATYSATAKGDARSSGTKSLVFFGNVNKDFDLEDLLRASAEVLGKGTFGTTYKATLEMGIVFAVKRLKDVTAPESEYREKIEEVGKVGHENLVPLRAYYYSRDEKLLVYDYMPTGSLSALLHGSSPAGRTPLNWEARSGIALGAARGIAYLHSQGPNISHGNIKASNILLTKSFEARVSDFGLSHVALPTSIPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKTPAHLLNEEGVDLPRWVQSVQDEGNTEVFDTELLKHQNVEEEMVKMLQLALECTAQYPDKRPSMDVVASKIEEVCHSNVEKEDDKEFHSFKDAEDGFSQQYFSFDSTGPPPSIEN 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02447 647 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Bva12g02447 647 ProSiteProfiles Protein kinase domain profile. 339 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02447 647 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Bva12g02447 647 Gene3D Transferase(Phosphotransferase) domain 1 414 629 - -
Bva12g02447 647 SUPERFAMILY L domain-like 53 207 - -
Bva12g02447 647 MobiDBLite consensus disorder prediction 274 314 - -
Bva12g02447 647 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Bva12g02447 647 PANTHER INACTIVE RECEPTOR KINASE-RELATED 9 611 - -
Bva12g02447 647 CDD STKc_IRAK 345 605 - -
Bva12g02447 647 PANTHER OS05G0588300 PROTEIN 9 611 - -
Bva12g02447 647 SMART LRR_typ_2 161 184 IPR003591 -
Bva12g02447 647 SMART LRR_typ_2 89 112 IPR003591 -
Bva12g02447 647 SMART LRR_typ_2 113 137 IPR003591 -
Bva12g02447 647 SUPERFAMILY Protein kinase-like (PK-like) 343 601 IPR011009 -
Bva12g02447 647 Gene3D Phosphorylase Kinase; domain 1 304 413 - -
Bva12g02447 647 MobiDBLite consensus disorder prediction 294 314 - -
Bva12g02447 647 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Bva12g02447 647 Pfam Protein kinase domain 342 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02447 Bva-Chr12 18457702 18460931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02447 25 606 Receptor kinase-like Gene Family AT1G48480 58.766 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g02447 Pkinase 5.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02447 - - aprc:113846223 796.964