Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02434 ATGGACTCCACCCCTGCCCCTCCTCACCCCCCACCCGTTGGCGTTAAAGCCTCTGCTACCATTACCAAGCTTCCCATCAAACGCAAAACCCCTGACTCCTCAACCATCACTGCCCCACATCCTGATCCTTATTTTGACCCTAACCCTAATTTCCTCTGCGCCGATGACCCTGTCACCGCAGCCGATGTGGGTGTCCGGCAACCACCTTTCAAATTCCACCGAATTTGGACAGAGCCCGACGAAATTCGATTCCTTCAAGGCCTTCTGGATTCTGCTTCTGATGGCCTTGTGTTCCCGAAAGATTTGAACCTCTTCTATGAGCGATTCTCCACTGCCATGTCTCAGCCCTATTCCAAGTCTCAGCAATCAGAGAAGCTTCGCCGTCTGAGGAAGAAGTTCCGGGCAATCTCGTCTCGTCTCGCTCGAGGCCTCGATGCTGCCGTGTTGTCGCCGCACGATCGTGCACTATATGATCTCTCAAAGAAGCTGTGGAGCCCCGAGTTCTCTCCAATTTCTCCTTTCGTTACCAGTTCCGGCCAAGCAATTAAGAGCAGCAGCAAGATCAATAGTGAAAACGATTCTATTGGTGTTAATCAGAACGAGCTCGGTGACCCATTTGGGATCTACGTCGACGGCGATGATCACAATAAGGATGGTgattatgacaaaaaattggGCGAATCGAATGTTGATGGTGAGCAAAAAGAAGATGTTTTTGACAGAAATTTTGGCGGGTTGACTGCAAAAACGGTTCTAGAAGTGCTTGATCAGTCTCTGAAGGAGGTGAAAATGGCTCTTGTGTGGCAGGGGATTCATTTCCCGTATCATAATCCTACTCAATCTTCCAGAGAAGGGAGTGCGATTGAATTTGGAAGAAGGTGGCAGGAGCAGCGAGCATTAGAATTTGATGTGTTTGCTAAGCGTTTGAAATTGGTGCTTGAGAATACTCTTCTTCATAAGCCTTG 965 0.4819 MDSTPAPPHPPPVGVKASATITKLPIKRKTPDSSTITAPHPDPYFDPNPNFLCADDPVTAADVGVRQPPFKFHRIWTEPDEIRFLQGLLDSASDGLVFPKDLNLFYERFSTAMSQPYSKSQQSEKLRRLRKKFRAISSRLARGLDAAVLSPHDRALYDLSKKLWSPEFSPISPFVTSSGQAIKSSSKINSENDSIGVNQNELGDPFGIYVDGDDHNKDGDYDKKLGESNVDGEQKEDVFDRNFGGLTAKTVLEVLDQSLKEVKMALVWQGIHFPYHNPTQSSREGSAIEFGRRWQEQRALEFDVFAKRLKLVLENTLLHKP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02434 321 PANTHER EXPRESSED PROTEIN 2 316 - -
Bva12g02434 321 MobiDBLite consensus disorder prediction 1 41 - -
Bva12g02434 321 PANTHER BNAANNG10740D PROTEIN-RELATED 2 316 IPR007592 GO:0006355
Bva12g02434 321 Pfam Protein of unknown function, DUF573 72 165 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02434 Bva-Chr12 18377671 18378865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02434 72 314 GeBP Transcription Factor Family AT5G28040 27.491 1.29e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Bva12g02434 DUF573 5.4e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02434 - - vri:117929768 267.314