Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02432 atgaagaggaaTCACAAAGCTACCCTCGAATTTGGAGGCGGTGGTTCTGGGTATGGCGTTGGAGGAAGCGGGAACAGTAGCAGTGTTGTTGTAAAAGGTGAATGCTCAACAATGTCAAGTGCGAAAGCTAAGATGTGGGGGGAGGAGCACGAGGCAGGTGGCATGGATGAGTTGCTTGGGGCTTTGGGTTACAAGGTGAGGTCGTCGGACATGGCAGATGTGGCGCAGAAGCTTGAGGAGCTGGAGATGGTGATGGGCACAGCTCAGGAAGATGGAATTTCCCATCTTGCTTGTGACACCGTCCACTACGACCCAACCGATCTCTATGGCTGGGTTCAGAGGATGCTCACTGAGCTCAACAATTCCCCCAATGATCCAACGGAATTTTTCGGGAACCATCAAATACCcaatattgattttgaaaatcaatCTCCAGTTTTCAACGATGATTCGGAGTATGATCTCCGAGCAATTCCAGGCATGGCGGCATACCCACAAATCGAGCCAGATAGCGAAAGCAGCCAGAAGCGAGTGAGAAGTTCCTCAGTTGGATCAGATTCGATTCCTGTGTTGCCTCCGTCGCCTTCAGCATCAAATGTGTCAGAGTCGACTCGCCCCGTGGTTCTTGATGACTCGCAAGAAGCTGGTGTTCGTCTCGTCCATACTCTCATGGCTTGTGCAGAAGCTGTTCAGCAGAACAATTTGAAGCTTGCAGACGCGCTGGTTAAGCACGTAGGCGTGCTTGCAACGTCTCAAGCCGGAGCAATGAGGAAGGTAGCCACCTACTTCGCCCAAGCTTTAGCTCGTCGAATTTACCGAATCTACCCTGACGAAGCTCTCGATTCCTCTTTCTCTGACATGCTCCACATGCATTTCTACGAGTCCAGCCCCTACCTGAAATTCGCCCATTTCACTGCGAACCAAGCAATTCTCGAAGCATTTGCGACGGCGAACCGGGTCCACGTCATCGACTTCGGATTAAAGCAGGGGATGCAATGGCCCGCTTTGATTCAAGCACTCGCATTGCGATCCGGTGGTCCACCGAAGTTTCGGCTCACTGGAATCGGACCCCCACAACCCGATAACACTGATGCACTGCAACAAGTGGGTTGGAAATTGGCGCAATTGGCTGAAACCATTGGGGTCCAATTCGAATTCCGTGGATACGTCTGCAACAGTTTGGCGGATCTTGACCCAACCCATCTCGAAACCCGACCCGGAGAAGCCGTGGCGGTTAACTCCGTTCTCGAGCTCCACCGCACGTTGGCTAGACCCGGTGCGGTTGAGAAGGTGCTGAGCACGATCAAGGCAATAAAACCACAAATTGTGACCATTGTGGAACAAGAAGCGAACCACAACGGGCTGGTTTTCTTGGACCGATTCTCGGAGGCTCTGCACTACTACTCCAGCCTATTTGATTCGCTGGAGGGATCGGCAGCCGGCTTAACGCCGCCGAGTCAGGACCTGATTATGTCGGAACTGTACCTGGGGAGACAGATATGCAACGTGGTGGCGTGTGAAGAGTCGGAACGAGTCGAGAGGCACGAGACGCTGGCTCAATGGAGGACTCGGATGGTTTCGGCCGGATTCGACCCGGTTCGTTTGGGTTCGAATGCGTTCAAGCAAGCAAGCATGTTACTGGCTCTGTTCGCTGGTGGAGAAGGTTACAGAGTGGAAGAGAGCAACGGGTGCCTCATGTTGGGTTGGCATACCCGCCCACTCATCGCTACCTCGGCTTGGAAAATTCCCGCCACTGAATCGTA 1763 0.5235 MKRNHKATLEFGGGGSGYGVGGSGNSSSVVVKGECSTMSSAKAKMWGEEHEAGGMDELLGALGYKVRSSDMADVAQKLEELEMVMGTAQEDGISHLACDTVHYDPTDLYGWVQRMLTELNNSPNDPTEFFGNHQIPNIDFENQSPVFNDDSEYDLRAIPGMAAYPQIEPDSESSQKRVRSSSVGSDSIPVLPPSPSASNVSESTRPVVLDDSQEAGVRLVHTLMACAEAVQQNNLKLADALVKHVGVLATSQAGAMRKVATYFAQALARRIYRIYPDEALDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFATANRVHVIDFGLKQGMQWPALIQALALRSGGPPKFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVQFEFRGYVCNSLADLDPTHLETRPGEAVAVNSVLELHRTLARPGAVEKVLSTIKAIKPQIVTIVEQEANHNGLVFLDRFSEALHYYSSLFDSLEGSAAGLTPPSQDLIMSELYLGRQICNVVACEESERVERHETLAQWRTRMVSAGFDPVRLGSNAFKQASMLLALFAGGEGYRVEESNGCLMLGWHTRPLIATSAWKIPATES 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02432 587 Coils Coil 71 91 - -
Bva12g02432 587 Pfam Transcriptional regulator DELLA protein N terminal 56 123 IPR021914 -
Bva12g02432 587 PANTHER DELLA PROTEIN RGL1 51 581 IPR030006 GO:0003712|GO:0005634
Bva12g02432 587 SMART DELLA_2 56 129 - -
Bva12g02432 587 MobiDBLite consensus disorder prediction 163 207 - -
Bva12g02432 587 Gene3D - 54 119 IPR038088 -
Bva12g02432 587 Pfam GRAS domain family 219 581 IPR005202 -
Bva12g02432 587 ProSiteProfiles GRAS family profile. 210 581 IPR005202 -
Bva12g02432 587 MobiDBLite consensus disorder prediction 168 207 - -
Bva12g02432 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 581 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02432 Bva-Chr12 18363633 18365893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02432 57 582 GRAS Transcription Factor Family AT3G03450 64.794 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g02432 GRAS 3.7e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02432 K14494 - gmx:100799695 833.943