Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02429 ATGGAGAATTTGATGGGCTTGCTCAGGATTCATGTCGAAAAGGGAGAGAATCTCGCTGTCAGGGATGTTCTAAGCAGCGATCCTTATGTGATTATCAAAATGGGCAAGCAGAAACTGAAGACTAAGGTTGTGAAGCAGAGTATCAACCCTGAGTGGAATGATGATTTGACTTTATCCATTTCAGATCCACGTCTTCCTGTCCAACTTTTTGTGTATGACAAGGACAGATTCAGCTTGGATGACAAAATGGGGGATGCTGAGTTTGACATTAACCCTTTTCTGGAAGTGTTGAGGATGAGGTTGGAAGGCATTCCAGATGGAACCATAATCACAAGAATACAACCAAACAGGCAAAATTGTCTGGCTGAAGAGAGCCAAATCGTGTTGCAGAAAGGGAAAGCTGTGCAGAACATGTTTCTTAGACTCAGAAATGTGGAATCTGGGGAAGTTAAGCTGCAGTTGCATTGGATTGACATTCCTGGTTCCAGAGGTCTCTA 497 0.4326 MENLMGLLRIHVEKGENLAVRDVLSSDPYVIIKMGKQKLKTKVVKQSINPEWNDDLTLSISDPRLPVQLFVYDKDRFSLDDKMGDAEFDINPFLEVLRMRLEGIPDGTIITRIQPNRQNCLAEESQIVLQKGKAVQNMFLRLRNVESGEVKLQLHWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02429 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Bva12g02429 165 Gene3D C2 domain 2 163 IPR035892 -
Bva12g02429 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bva12g02429 165 CDD C2_ArfGAP 6 148 - -
Bva12g02429 165 SMART C2_3c 7 102 IPR000008 -
Bva12g02429 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva12g02429 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 156 IPR035892 -
Bva12g02429 165 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02429 Bva-Chr12 18345420 18346870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02429 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 1.52e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02429 - - qsu:112031486 271.166