Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g02428 | ATGTGGGAACAGGATGAACAACCTACAGACGTAGCTTGTGAAAAACTGAGAAAGATATCGTTAATCTGGCTTCTAGCTAGACAGATAGTTTGCTGGGGACCTGAGATGGAGGGGTCGAGCTTAAGAAAAGGTGCATGGACTGTGGAGGAAGATAACCTTCTTAGGTCATGCATTCAAAAATATGGGGAGGGAAAATGGCATTTAGTTCCCCAAAGAGCAGGCTTGAACAGGTGCCGGAAAAGCTGTAGATTGAGGTGGTTGAATTACCTAAGCCCTAACATCAAGAGAGGATGCTTTACAGAAGACGAAGTTGACATGATAATAAGGTTCCACAGCCTCCTCGGAAACAGATGGTCCCTCATTGCTGGAAGACTTCCTGGAAGAACAGCTAATAATGTGAAGAACTATTGGAACACCAATTTGCGCCATAGGATCTCAGAAAAGGTGAACCAGTTGAAAGAGAAGAGTAACGTGACCATGAAAACTCACGAAGTAATAAAGACTAAACCTAGAATCTTCCCCCAAAACTCGCCATGGCTGAGGGGGAAACTACCTATGTTCACAAACGATAACGAGCCCATACAACCTGtttttgcaaaaaattatGGTGTGGGAGAGTGCAGTAGTGCTGCACAATCTATGTTCCCAAATCTGGGAGACTCGTGTCTTCCAGATCCATCACTGCCAGAGAATTGGAGAGGGTTGTTGAAGAGATTTCTGGACGAAGTGATGGCCGACAACAAGGGAAAAAGTGCACACTCTCCAACGGGTCAGAATACGAAGAAAGCTTACGTGGACGACGAAGAACTTGCTGGAATGATGACAGGCCTAGGGGAGGGGGACTATTCCCTTGAAGAACAGGGTTTTTGGAATGACTTGCTCCGTTTGGACGATGCCAACGAATGGAATTTGAATTTCCCTTCTGATTA | 929 | 0.4489 | MWEQDEQPTDVACEKLRKISLIWLLARQIVCWGPEMEGSSLRKGAWTVEEDNLLRSCIQKYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLSPNIKRGCFTEDEVDMIIRFHSLLGNRWSLIAGRLPGRTANNVKNYWNTNLRHRISEKVNQLKEKSNVTMKTHEVIKTKPRIFPQNSPWLRGKLPMFTNDNEPIQPVFAKNYGVGECSSAAQSMFPNLGDSCLPDPSLPENWRGLLKRFLDEVMADNKGKSAHSPTGQNTKKAYVDDEELAGMMTGLGEGDYSLEEQGFWNDLLRLDDANEWNLNFPSD | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g02428 | 309 | CDD | SANT | 99 | 141 | IPR001005 | - | |
Bva12g02428 | 309 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 38 | 94 | IPR017930 | - | |
Bva12g02428 | 309 | Gene3D | - | 98 | 169 | - | - | |
Bva12g02428 | 309 | Gene3D | - | 43 | 95 | - | - | |
Bva12g02428 | 309 | SMART | sant | 42 | 92 | IPR001005 | - | |
Bva12g02428 | 309 | SMART | sant | 95 | 143 | IPR001005 | - | |
Bva12g02428 | 309 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 40 | 177 | - | - | |
Bva12g02428 | 309 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 95 | 145 | IPR017930 | - | |
Bva12g02428 | 309 | PANTHER | TRANSCRIPTION FACTOR MYB113-RELATED | 40 | 177 | - | - | |
Bva12g02428 | 309 | CDD | SANT | 45 | 90 | IPR001005 | - | |
Bva12g02428 | 309 | SUPERFAMILY | Homeodomain-like | 41 | 137 | IPR009057 | - | |
Bva12g02428 | 309 | ProSiteProfiles | Myb-like domain profile. | 91 | 141 | IPR001005 | - | |
Bva12g02428 | 309 | ProSiteProfiles | Myb-like domain profile. | 38 | 90 | IPR001005 | - | |
Bva12g02428 | 309 | Pfam | Myb-like DNA-binding domain | 96 | 141 | IPR001005 | - | |
Bva12g02428 | 309 | Pfam | Myb-like DNA-binding domain | 43 | 90 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g02428 | Bva-Chr12 | 18333809 | 18335637 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g02428 | 41 | 173 | MYB Transcription Factor Family | AT1G66370 | 63.121 | 6.92e-56 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Bva12g02428 | Myb_DNA-binding | 3.4e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g02428 | - | K16166 | mtr:MTR_5g078860 | 215.698 |