Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02425 ATGGGTTTCCCCCAAGGAACCAGCACTGATTCGAGGGAGCCTTTTAATACACCAAATGCTTCTCTATACGCTTCCTCTGTAGTTGCAGATCAGTACTGTGACTACAAGCAGCTCAAATTCAAACACATTTTGAGAAGAATGATCAGGGAGCTTGGGTTGGCCTGTGTTAGGCCCTCTCGCCGCTTTCGAGGCTCAGGGAAATTTCAGGGTCAGGGCAAAAGCGACGGTACCGGCCACAAGAAGACAAATTTAGAGCACAACAAAGCATGGCTGCTTGCGGAGTCTGGTGGGTGTGGACCAGAATTGACAACTGCGGACCCTCAATCAGTGCACTCATCTTTCAGGTTTAGCTTGTGCTCTCAGGTTGAGCTGGAATCCTTGAACATGAGTTCTTCTGCAGCTGCAACTGTTTTGATGGTTAATTTGGACGATGGGGCGAATGAATCTCGAGCCAGAGAGCTGAAATGGCGGAGAATAGAGTCATTGGAGAAAAGCATATCCCCAGTGGCCAACACTTTGATAAGATTCAACTACGGTGAAATTCTATATGCTACTCGCAATTTCTCAAaagGCAGGGTATTGGGAAGAGGAGCGTTAAGCTATGTTTTTAGAGGAAGACTTGGGCTTTTGAGGACTGCAGTGGCAATTAAACGGTTGGACAAGGAAGACAAGGAGTCTGCAAAAGCATTCTGCAGAGAATTGATGATTGCTAGTTCTCTTCATAACTCGAACATTGTTCCCCTTGTGGGTTTTTGTATTGACCCAGAAGAGGGTTTGTTTTTGGTCTACAAGTATGTCTCGGGAGGAAGCTTAGAGCGTCACTTGCATGGGAGGAAAAAGGGTGTGAAGGGTGGTTCACCACTTCCATGGTCTGTGAGGTATAAAGTTGCCATTGGAATTGCTGAAGCTGTGGCTTATCTGCATAATGGAACTGAAAGATGTGTCGTTCACAGAGACATTAAACCATCAAACATTCTTCTTTCCTCTAAAAAGACTCCCAAGTTGTGTGATTTTGGCTTAGCTACATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACAGTCAAAGGAACATTTGGTTATTTGGCTCCAGAGTATTTCCAACATGGGAAAATATCAGATAAGACTGATGTTTATGCTTTTGGTGTGGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATTGAAGCAAAAAGGCCATCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCATTGTTACAAAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTTATCTCAAGTGCAGTCTGAGATGCTCGAATCAGATGGCTCGGATGATTGAAGCTGCTGCTGCTTGTGTTACAAATGAAGAATCTCGGAGACCCGGCATTCATGAAATCATTGCAATACTGAAAGGTGAAGAAGAACCCATTCTGTCTAGAAGGAAGAAATCTAATTTCCTAGGTAATGGGTGCGTGATCGATTGTCACTCTCAATcacaacaaacaaataatgagATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTGCAGAGCTTGAAGATGATGATTACCTCTATGGTCGTTA 1583 0.4371 MGFPQGTSTDSREPFNTPNASLYASSVVADQYCDYKQLKFKHILRRMIRELGLACVRPSRRFRGSGKFQGQGKSDGTGHKKTNLEHNKAWLLAESGGCGPELTTADPQSVHSSFRFSLCSQVELESLNMSSSAAATVLMVNLDDGANESRARELKWRRIESLEKSISPVANTLIRFNYGEILYATRNFSKGRVLGRGALSYVFRGRLGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHNSNIVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGVKGGSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKISDKTDVYAFGVVLLELITGRKPIEAKRPSGEENLVLWAKPLLQKGKGAIEELLDPYLKCSLRCSNQMARMIEAAAACVTNEESRRPGIHEIIAILKGEEEPILSRRKKSNFLGNGCVIDCHSQSQQTNNEMKSHLALAMLGVAELEDDDYLYGR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02425 527 PANTHER OS01G0750732 PROTEIN 1 525 - -
Bva12g02425 527 ProSiteProfiles Protein kinase domain profile. 188 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02425 527 Gene3D Phosphorylase Kinase; domain 1 148 265 - -
Bva12g02425 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Bva12g02425 527 Gene3D Transferase(Phosphotransferase) domain 1 266 484 - -
Bva12g02425 527 SMART serkin_6 188 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02425 527 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 525 - -
Bva12g02425 527 SUPERFAMILY Protein kinase-like (PK-like) 169 468 IPR011009 -
Bva12g02425 527 Pfam Protein kinase domain 189 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02425 Bva-Chr12 18324605 18327162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02425 176 505 Trihelix Transcription Factor Family AT1G70460 40.663 3.87e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva12g02425 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02425 - - gmx:100808074 863.218