Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02422 ATGGCACTGGCCAAAGACAGAATTCCCCATGACTTGGCCAGCAAGGTTCAAGCTTGTGTCTTCAATGAGGCTGCTTCTGGGGTCAATGAGTACCACAAATCTGTgcttgaagatgaagaagggTCACAAAGCACTAATGGGTTCAGCACTGATTCTGCCATAACCCATTCTCCTCCTCTTTGTGGCAGTGGCAAGGGATGTGCTTATAGGCCAGAAGAAGCAGAGTCTTTGATCAATTTCAAAGCCAGTGGTCATTACAACAATCTCATGCATGATAGTGAATCCTTTTTGAGCTTTCAGCAGAGCAAAGAGAGAGAGTACTCTATATGGGAGAATAGCTTGCTTCATAGTCCTAAAAGCACCATGGAGCCTCGCTTGATGCAAGATTTCAACTGCCTTCAAATGGCGAGTGGCTATAGCGCCATGGCCAATAGTGGAAAGGAAAAGCACCATGGAGAAAGTTCTTATGGGTGGCTATACTCCGAGTCAAATGTCACTGCTGATAGCCTGCAGAACTcaggagaagaagaagcagtCTTCAACAAGCGTTCTTCTCAGGGAGAGAGCATGCAAGCTGCAAAGAAGCAATGCAATAGTACTGCTGCAACCAAAAAGCCAAAACCAAAGTCCAATCCATCCAAGGACCCACAAAGTATCGCAGCCAAGAACAGAAGGGAGAGGATAAGCGACCGGCTTAAGATACTGCAAGAACTGGTGCCTAATGGCTCCAAGGTTGACTTGGTTACCATGTTGGAGAAAGCCATTAGCTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTTTTGGCAACTGATGAATTCTGGCCTGTCCAAGGTGGAAAGGCTCCTGACATATCTCAAGTCAAAGAAGCCATCGATGCCATTCTTTCTTCCCAGAAAGACAGAAATTCAAGCTCAAAATA 920 0.437 MALAKDRIPHDLASKVQACVFNEAASGVNEYHKSVLEDEEGSQSTNGFSTDSAITHSPPLCGSGKGCAYRPEEAESLINFKASGHYNNLMHDSESFLSFQQSKEREYSIWENSLLHSPKSTMEPRLMQDFNCLQMASGYSAMANSGKEKHHGESSYGWLYSESNVTADSLQNSGEEEAVFNKRSSQGESMQAAKKQCNSTAATKKPKPKSNPSKDPQSIAAKNRRERISDRLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAILSSQKDRNSSSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02422 306 MobiDBLite consensus disorder prediction 170 218 - -
Bva12g02422 306 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 297 - -
Bva12g02422 306 CDD bHLH_AtIND_like 213 275 - -
Bva12g02422 306 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 297 - -
Bva12g02422 306 Gene3D - 207 269 IPR036638 GO:0046983
Bva12g02422 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 261 IPR011598 GO:0046983
Bva12g02422 306 Pfam Helix-loop-helix DNA-binding domain 219 262 IPR011598 GO:0046983
Bva12g02422 306 MobiDBLite consensus disorder prediction 170 225 - -
Bva12g02422 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 271 IPR036638 GO:0046983
Bva12g02422 306 SMART finulus 218 267 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02422 Bva-Chr12 18309815 18311172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02422 158 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 71.812 5.02e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva12g02422 HLH 4.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02422 - - gmx:100810010 370.933