Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02403 ATGAGTGATGCAATTGATTTGACTGGTGATGGAGGAGTCATCAAGACCATTGtgagaaaaagcaaaattgatGCTGTGGCTCCAACAGAGGATCTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGACACTGGTGAAGTTTTTGACTCTACCCATGAAGATAACTCTATATTCTCTTTTGAGCTCGGAACAGGCAATGTTATCAAGGCTTGGGACATTGCTGTGAAAACCATGAAGGTTGGAGAAATTGCAAAAATCACTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCCCCAGACATCCCCTCAGATGCGACGCTTGTTTTCGAGGTTGAGCTAGTTGCCTGTAGGCCAAGGAAGGGTTCCACGGCAGGAAGTGTCTCAGAGGAGAGAGCTAGGCTTGAagagctGAAGAAGCAGAGAGAGATGGCTGCTGCTGCAAAagaggaggagaagaagaagagggaaGAAGCAAAAGCAGCAGCTGCTGCTCGCGTGCAAGCCAAGTTAGAAGCCAAGAAAGCtcaaggaaagggaaaaggTAGAGCAAAGTA 566 0.417 MSDAIDLTGDGGVIKTIVRKSKIDAVAPTEDLPLVDVHYEGTLADTGEVFDSTHEDNSIFSFELGTGNVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPSDATLVFEVELVACRPRKGSTAGSVSEERARLEELKKQREMAAAAKEEEKKKREEAKAAAAARVQAKLEAKKAQGKGKGRAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02403 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Bva12g02403 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Bva12g02403 188 Coils Coil 131 170 - -
Bva12g02403 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
Bva12g02403 188 SUPERFAMILY FKBP-like 8 124 - -
Bva12g02403 188 MobiDBLite consensus disorder prediction 142 188 - -
Bva12g02403 188 Gene3D - 2 120 IPR046357 GO:0003755
Bva12g02403 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
Bva12g02403 188 MobiDBLite consensus disorder prediction 142 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02403 Bva-Chr12 18172295 18174857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02403 4 146 Calmodulin-binding Proteins AT5G48570 34.459 1.62e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02403 K01802 - gmx:100500018 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02403 12 18172295 18174857 Bva12g02403 12 18172295 18174857 ECH