Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02382 ATGGCTGGAGTCTGTTGTGGGGTTGTTGGAGAAGGAGAAACGCCGACTCCAATTGAACCTAGCTCAGGGGCCTCTCGGAGCCGGAGGTTGGATCTCCTCCCCTTTAAATATATGGCCGACGCGTCGGTGACACCAACGGCAACGGAAAATAGCCGTAAGCGCCAGAAGAGGGTGCATCTCTGTGATTCTCCAACACAACCCCGGGAGTGCGAAAACGCAGTTGAGAATTGTGAATTGAAAAGTGATAAACCTGAGATTGAACAAGATAAAGAATCTAAGCTTGCGAATGAACCTGCTATTTCTATCTTAAATTCGACCGAGGTGGAAAATGAGGCTGTTAAGGACTACCCAAAATTTGGTGTCACATCGGTGTGTGGTAGGAGGAGGGATATGGAAGACGCTGTTTCAATTCATCCGTCGTTCTCCCAAGAAGAGGGACTAAACCAGAAGGGTTTCCATTTCTTCGGTGTATACGACGGGCATGGCTGCTCTCATGTGGCGACCATGTGTAAGGATAGGCTACACGAGATTGTGAAGGAAAAGCTCGAAGGAGCTCGAGAAAATCTCGAATGGAAGTCCATGATGGAGCACAGTTTTGGTCGCATGGACGAGGAGGTGCAGAACTGGACACAGAGTAACAACCAGAGCGCCACGTGTAGATGTGAGCTTCAAACTCCCCACTGCGACGCCGTTGGATCTACGGCTGTTGTCGCCGTTGTAACGCCGGACAAGGTCATCGTCTCCAACTGTGGCGATTCCCGCGCCGTCCTCTGCCGAAATGGCGTCGCAATCCCTCTCTCTTCCGATCACAAGCCCGACCGACCCGACGAACTGCTCCGCGTTCAAGCTGCCGGAGGGCGCGTGATATATTGGGATGGACCAAGAGTGCTTGGAGTGCTGGCTATGTCGAGAGCAATAGGAGACAATTATCTGAAGCCGTACGTGATTTCGGAACCGGAGGTAATGGTAACGGAACGGACGGACGAGGACGAGTGTTTGATTCTGGCGAGCGATGGGCTCTGGGACGTAGTGTCAAACGACACAGCAAGCGGGGTGGTGCGGATGTGCTTGAGGGCTCAGAAGCCGCCGTCGCCACCAGGGTCGCCGGGGAGCGACATGGTGGTTGGCTCCACGGCCGACGGCTCAGACAAGGCGTGCTCCGACGCGTCTATTCTGCTGACAAAGTTAGCGTTGGCAAGGCATAGTTCGGACAACGTGAGCGTGGTGGTTGTTGATTTGAGGAGAAATCAGGAATCCAACAAGAAGAAGgaggataataataatta 1286 0.5264 MAGVCCGVVGEGETPTPIEPSSGASRSRRLDLLPFKYMADASVTPTATENSRKRQKRVHLCDSPTQPRECENAVENCELKSDKPEIEQDKESKLANEPAISILNSTEVENEAVKDYPKFGVTSVCGRRRDMEDAVSIHPSFSQEEGLNQKGFHFFGVYDGHGCSHVATMCKDRLHEIVKEKLEGARENLEWKSMMEHSFGRMDEEVQNWTQSNNQSATCRCELQTPHCDAVGSTAVVAVVTPDKVIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVMVTERTDEDECLILASDGLWDVVSNDTASGVVRMCLRAQKPPSPPGSPGSDMVVGSTADGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRNQESNKKKEDNNN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02382 428 MobiDBLite consensus disorder prediction 360 379 - -
Bva12g02382 428 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Bva12g02382 428 PANTHER ALPHABET, ISOFORM E-RELATED 36 419 - -
Bva12g02382 428 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 36 419 - -
Bva12g02382 428 ProSiteProfiles PPM-type phosphatase domain profile. 118 413 IPR001932 -
Bva12g02382 428 CDD PP2Cc 118 358 IPR001932 -
Bva12g02382 428 Pfam Protein phosphatase 2C 119 385 IPR001932 -
Bva12g02382 428 SMART PP2C_4 106 411 IPR001932 -
Bva12g02382 428 SUPERFAMILY PP2C-like 116 414 IPR036457 -
Bva12g02382 428 Gene3D - 113 422 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02382 Bva-Chr12 18052788 18055060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02382 1 388 PP2C-type Phosphatase Gene Family AT3G11410 56.892 2.28e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02382 K14497 - gmx:100796161 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02382 12 18052788 18055060 Bva12g02382 12 18052788 18055060 ECH